Gene
| Gene Model ID | pfu_aug1.0_19858.1_25835 |
|---|---|
| Locus | scaffold19858.1 : 6188 ... 25383 : - |
| To GenomeBrowser | scaffold19858.1:6188..25383 |
| Genes list of scaffold | scaffold19858.1 |
| Synonym | pfu_aug2.0_3683.1_12507 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_19858.1_25835.t1 | 5 | 1 | SH3_9 | 2 | 32 | 1.4013e-45 | 152.0 | 3.3e-06 | 0.016 | 14.7 |
| pfu_aug1.0_19858.1_25835.t1 | 5 | 1 | SH3_1 | 2 | 28 | 8.80015e-43 | 143.4 | 6.1e-06 | 0.03 | 13.7 |
| pfu_aug1.0_19858.1_25835.t1 | 5 | 1 | SH3_2 | 2 | 35 | 4.8e-33 | 112.4 | 2.5e-05 | 0.12 | 11.8 |
| pfu_aug1.0_19858.1_25835.t1 | 5 | 2 | SH3_9 | 83 | 131 | 1.4013e-45 | 152.0 | 1.3e-14 | 6.7e-11 | 41.6 |
| pfu_aug1.0_19858.1_25835.t1 | 5 | 2 | SH3_1 | 83 | 126 | 8.80015e-43 | 143.4 | 3.6e-15 | 1.8e-11 | 43.2 |
| pfu_aug1.0_19858.1_25835.t1 | 5 | 2 | SH3_2 | 84 | 132 | 4.8e-33 | 112.4 | 6.4e-13 | 3.2e-09 | 36.1 |
| pfu_aug1.0_19858.1_25835.t1 | 5 | 3 | SH3_9 | 201 | 240 | 1.4013e-45 | 152.0 | 3.7e-13 | 1.8e-09 | 37.0 |
| pfu_aug1.0_19858.1_25835.t1 | 5 | 3 | SH3_2 | 201 | 238 | 4.8e-33 | 112.4 | 3.9e-09 | 1.9e-05 | 24.0 |
| pfu_aug1.0_19858.1_25835.t1 | 5 | 3 | SH3_1 | 202 | 236 | 8.80015e-43 | 143.4 | 1.2e-07 | 0.00058 | 19.1 |
| pfu_aug1.0_19858.1_25835.t1 | 5 | 4 | SH3_2 | 269 | 320 | 4.8e-33 | 112.4 | 9.0e-13 | 4.5e-09 | 35.6 |
| pfu_aug1.0_19858.1_25835.t1 | 5 | 4 | SH3_1 | 270 | 315 | 8.80015e-43 | 143.4 | 4.2e-18 | 2.1e-14 | 52.6 |
| pfu_aug1.0_19858.1_25835.t1 | 5 | 4 | SH3_9 | 271 | 319 | 1.4013e-45 | 152.0 | 2.0e-15 | 9.8e-12 | 44.2 |
| pfu_aug1.0_19858.1_25835.t1 | 5 | 5 | SH3_1 | 354 | 370 | 8.80015e-43 | 143.4 | 1.2e-06 | 0.0057 | 16.0 |
| pfu_aug1.0_19858.1_25835.t1 | 5 | 5 | SH3_9 | 355 | 371 | 1.4013e-45 | 152.0 | 6.4e-05 | 0.32 | 10.6 |
| pfu_aug1.0_19858.1_25835.t1 | 5 | 5 | SH3_2 | 355 | 370 | 4.8e-33 | 112.4 | 0.014 | 70.0 | 3.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_19858.1_25835.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19858.1_25835.t1 gttaatgaagttgtggtattattgaaaagggtagacgactcatggttgatgggccagatagggaatcggcaaggaatatt tccgcaggattttcttgccatacagattcctctaccaggagagcttcctccatctgagatggttatgaatacagcagatg ttactcgagatgtttggggagaagttagctatcaggaagaaattcaagaaaaaattgacaccataggaaaaggaccaaga tgctgtgctaggttcgactttgagggagggggtgccggtgatttacaatttgaagaaggggactatatcaaaatactaga aagagttgattccgagtggttgaggggagaactgcatggaacagttggcatctttccaatttcatttgtggagataattg aggatctcccattggacaattcagatttaggtcaaggacaagctggggtctcaggtcaaggtcaagtaggggtttcaact aataatagtttaacaacaagttctagcaatgagaatgtgacagttcaggaacaaggacatctacaacaagattttcaaca ggcagaattttcagctatggttctacataatcgcagagggggaccaggagaattatcacttcagtttggagattatgtga agctcatacatgaaatatcagatgattggttgtatggcgagattcgaggtcagaagggaaagttcccagtcagtattata gatgctgttcctccaggcttaccacaggatggggggtcccaacctcactctagtcctaagggtaccatgcaagggaccac actctgtgtggcaatgtatgacttccagagtattgatccaggggatttgaactttgtgacaggagacaagattgaaatta ttgaaaaactaggtgatgaatggctgaaaggaaaactgaatggaaaggaaggaattttcccgagtaactttgtgcaaata gaagaagtggagaatctaccaagaaatgagacccctgatcccaagcctgtatttactatagactcaccacagacctctga tgacatagcgaccactggtacagcattgtatgattttaatggacagaatgactctgaactatcatttcaggccttttaa |
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Protein
| Protein ID | pfu_aug1.0_19858.1_25835.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19858.1_25835.t1 VNEVVVLLKRVDDSWLMGQIGNRQGIFPQDFLAIQIPLPGELPPSEMVMNTADVTRDVWGEVSYQEEIQEKIDTIGKGPR CCARFDFEGGGAGDLQFEEGDYIKILERVDSEWLRGELHGTVGIFPISFVEIIEDLPLDNSDLGQGQAGVSGQGQVGVST NNSLTTSSSNENVTVQEQGHLQQDFQQAEFSAMVLHNRRGGPGELSLQFGDYVKLIHEISDDWLYGEIRGQKGKFPVSII DAVPPGLPQDGGSQPHSSPKGTMQGTTLCVAMYDFQSIDPGDLNFVTGDKIEIIEKLGDEWLKGKLNGKEGIFPSNFVQI EEVENLPRNETPDPKPVFTIDSPQTSDDIATTGTALYDFNGQNDSELSFQAF |
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