Gene
| Gene Model ID | pfu_aug1.0_19860.1_04044 |
|---|---|
| Locus | scaffold19860.1 : 23491 ... 29050 : - |
| To GenomeBrowser | scaffold19860.1:23491..29050 |
| Genes list of scaffold | scaffold19860.1 |
| Synonym | pfu_aug2.0_1746.1_21772 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_19860.1_04044.t1 | 3 | 1 | GCC2_GCC3 | 83 | 102 | 1.1e-19 | 69.7 | 0.2 | 500.0 | 0.3 |
| pfu_aug1.0_19860.1_04044.t1 | 3 | 2 | GCC2_GCC3 | 102 | 149 | 1.1e-19 | 69.7 | 2.4e-17 | 5.8e-14 | 51.3 |
| pfu_aug1.0_19860.1_04044.t1 | 3 | 3 | GCC2_GCC3 | 156 | 203 | 1.1e-19 | 69.7 | 3.6e-11 | 8.9e-08 | 31.6 |
| pfu_aug1.0_19860.1_04044.t1 | 2 | 1 | EGF | 209 | 236 | 8.6e-13 | 47.9 | 3.3e-08 | 8.1e-05 | 22.4 |
| pfu_aug1.0_19860.1_04044.t1 | 2 | 2 | EGF | 246 | 275 | 8.6e-13 | 47.9 | 2.2e-11 | 5.5e-08 | 32.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_19860.1_04044.t1 | gi|291229807|ref|XP_002734862.1| | 1.0e-33 |
Transcript
| Transcript ID | pfu_aug1.0_19860.1_04044.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19860.1_04044.t1 atatattgcggagaggaagatcgaaagcgaaagcggtctgcagagctgagagtggactttgagatcgagataacaattac tacaacagacgactttgatggtacttacaacacattacgaggacatgtaaacgaaatcacacatccgatatcagatgtga tactgaacacctccttggacctctctgctgtttgtaactgcactgcacaagcattagatataagctccagtgatttggaa ttgagctgtcctaacaacacgctaccatcataccctactctgtcatgtgttgaatgtgcggagggatcgtatctgtcctc cggagaaaaccaatgtatccaatgtcctcgaagtacttaccaacctgatgacggccaggaggaatgtctaccatgtccct atgggaagaccactgatacagtaggagcttcgtcagtatcaagttgtaaagatggctgtgatcctggtacatggtcaaca aatggcctaccgccatgctcgctctgccctattggcacatactctacaatttacggttctgatggatgtatcacatgtaa cggctccaaaacaactattgtagagggcggagatgatgaggcactttgtcaagatgttgatgattgcaatccaaaccctt gtaaaaatggcacttgctttgaagagggtactggatatgtatgtcgatgtgactatggttttcgtggaaacaattgtcaa atcaacattgatgactgtcaggacaatgtatgtgagaacaacgcaacctgccttgacggcgcagcaaactacacgtgttt atgccctgaaaattatactggagatttctgtgaaactcttctaggtcagacatgtttggatctgaagaacaattgtgttc atacttttcgtagttaa |
|
Protein
| Protein ID | pfu_aug1.0_19860.1_04044.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19860.1_04044.t1 IYCGEEDRKRKRSAELRVDFEIEITITTTDDFDGTYNTLRGHVNEITHPISDVILNTSLDLSAVCNCTAQALDISSSDLE LSCPNNTLPSYPTLSCVECAEGSYLSSGENQCIQCPRSTYQPDDGQEECLPCPYGKTTDTVGASSVSSCKDGCDPGTWST NGLPPCSLCPIGTYSTIYGSDGCITCNGSKTTIVEGGDDEALCQDVDDCNPNPCKNGTCFEEGTGYVCRCDYGFRGNNCQ INIDDCQDNVCENNATCLDGAANYTCLCPENYTGDFCETLLGQTCLDLKNNCVHTFRS |
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