Gene
| Gene Model ID | pfu_aug1.0_1987.1_29931 |
|---|---|
| Locus | scaffold1987.1 : 3776 ... 31213 : + |
| To GenomeBrowser | scaffold1987.1:3776..31213 |
| Genes list of scaffold | scaffold1987.1 |
| Synonym | pfu_aug2.0_279.1_30561 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1987.1_29931.t1 | 2 | 1 | RGS | 173 | 196 | 4.1e-35 | 120.4 | 0.33 | 2500.0 | -1.5 |
| pfu_aug1.0_1987.1_29931.t1 | 2 | 2 | RGS | 355 | 468 | 4.1e-35 | 120.4 | 5.6e-39 | 4.1e-35 | 120.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1987.1_29931.t1 | gi|291243911|ref|XP_002741844.1| | 1.4013e-45 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1987.1_29931.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1987.1_29931.t1 atgaggggtgttcatttagacgagtcgagatctccgattccgaaggactggaatccagatttagacgtctttgtacggga gttgacgaatcctcgcatcggcgttagtgaccgttctcagtcactagattcacattccttggaaagtaacgtaaacagac gtgacaaaatgaggctcaaatcaacagacttggcggaggaactgaataccaaatgtacagtaacagagaaagattccgtg gaaaagaaagacaaacttgatctcggaaatgcacgcaaaagttggcggaagcgcatgatggaacgccgtgcaagccgcgg taaaccgatgaattcacaggaccttgatgagtcggcagaactttccttggagtccactaatgccgacagcttcgaaacgc catctatgtcttttgatagtacgtcttcagaaaggaaaggttcaaaagaatcgtttaatggcgaatcatctgaggcgtcc gatcacgattcacagtcccagagaaagggaagcgatgcgtgtcacaaatatgtaaagaaagaaaaagacaaagattccaa acgcagacgtttccggcgtatgatcaccaggcctttacggcggagtcatagtgccggatgtgaaaaagacattccagcgc atgcgctcttcatgcagaaatgccttgataacgaaaaagacacgatggagagtcgagcagaagatcttacaagattccac aaacgaatcatcactacagataacaaccatgagaatatacgaaagcccatacacaaaacatgttccgccgactctgctat gatgacgacagaggagtttccgagtgtcaacggaaatggcgcacagaagaaaacaagaaacattttcttacttgaagtca tgggaaggccgcggggaaacagttttggtgaaatcgtccataaaagtgcccgtaacatgaagaaaaaattccagtttctt cgtcggcgaaacacggacacagctataacaagtggtttaggaggaacgtcatcggcattgtacagacgccccaccgccgg acaggctatggagtggagcaggtcgtttgaatctctccttagcgataaaagtgggttagaattatttcgtggctttctgc gctccgaattcagcgaggagaacttagagttttggttggcatgtcaggaatacaaagacagccctgacgtcacctctata tgtagccattccaaacaaatctttgatgactatgtagctctgcaagcaccaaaagaggtgaatctggattccaaaacaag aatgaagacagtattgaaccttgagaaccccacgagactctcctttgacgacgctcagaggaggatccaaagtttaatgg agaaagactcatatccaaggtttctagagtccgagttatacctgtgtatagtaggcgaacatggcggagaggactcgcat gcctga |
|
Protein
| Protein ID | pfu_aug1.0_1987.1_29931.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1987.1_29931.t1 MRGVHLDESRSPIPKDWNPDLDVFVRELTNPRIGVSDRSQSLDSHSLESNVNRRDKMRLKSTDLAEELNTKCTVTEKDSV EKKDKLDLGNARKSWRKRMMERRASRGKPMNSQDLDESAELSLESTNADSFETPSMSFDSTSSERKGSKESFNGESSEAS DHDSQSQRKGSDACHKYVKKEKDKDSKRRRFRRMITRPLRRSHSAGCEKDIPAHALFMQKCLDNEKDTMESRAEDLTRFH KRIITTDNNHENIRKPIHKTCSADSAMMTTEEFPSVNGNGAQKKTRNIFLLEVMGRPRGNSFGEIVHKSARNMKKKFQFL RRRNTDTAITSGLGGTSSALYRRPTAGQAMEWSRSFESLLSDKSGLELFRGFLRSEFSEENLEFWLACQEYKDSPDVTSI CSHSKQIFDDYVALQAPKEVNLDSKTRMKTVLNLENPTRLSFDDAQRRIQSLMEKDSYPRFLESELYLCIVGEHGGEDSH A |
|