Gene
| Gene Model ID | pfu_aug1.0_1987.1_29933 |
|---|---|
| Locus | scaffold1987.1 : 59356 ... 66583 : + |
| To GenomeBrowser | scaffold1987.1:59356..66583 |
| Genes list of scaffold | scaffold1987.1 |
| Synonym | pfu_aug2.0_279.1_30560 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1987.1_29933.t1 | 2 | 1 | Choline_transpo | 17 | 59 | 9.9e-22 | 77.1 | 0.0028 | 42.0 | 2.7 |
| pfu_aug1.0_1987.1_29933.t1 | 2 | 2 | Choline_transpo | 131 | 210 | 9.9e-22 | 77.1 | 6.6e-26 | 9.9e-22 | 77.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1987.1_29933.t1 | gi|291240636|ref|XP_002740220.1| | 5.0e-30 |
Transcript
| Transcript ID | pfu_aug1.0_1987.1_29933.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1987.1_29933.t1 atgtcagcgtcagagatcgtagagttggtgttcaaggacattatatcctcttggtacctcttactagtatttttagggat agccatggttggatgttttctgtggatcatactactcagatttatagcagctatttactacagttattctacatactatg acctgaagaatcagaacattactgccacatggcaagtctccgaggcgtttgctcttaacttcagctactacctcggactg aaagaaacatggctagcatttgatgtgaccttaacaaagaaaaccagttatattgcctctatgggagattcatcatacta cactaacgggacaaacacgactcaagacacaatcaattattaccttgagaggataccttgctcacctaacatcgcggtgt atgggaaaaatttctgtacagctgctaaagatgctttcttcctaatcatcagaaatgttgtcagggccgttgtacttgac aagatcacagattatgtcctgtttctaagtaaacttctagtcacagctggagtaggtattggagcattttactggttcca gggaaatttagatttctttgctgattatgttccctcactcaattactactttactccagttattgtaagtatttaa |
|
Protein
| Protein ID | pfu_aug1.0_1987.1_29933.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1987.1_29933.t1 MSASEIVELVFKDIISSWYLLLVFLGIAMVGCFLWIILLRFIAAIYYSYSTYYDLKNQNITATWQVSEAFALNFSYYLGL KETWLAFDVTLTKKTSYIASMGDSSYYTNGTNTTQDTINYYLERIPCSPNIAVYGKNFCTAAKDAFFLIIRNVVRAVVLD KITDYVLFLSKLLVTAGVGIGAFYWFQGNLDFFADYVPSLNYYFTPVIVSI |
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