Gene
| Gene Model ID | pfu_aug1.0_1987.1_29935 |
|---|---|
| Locus | scaffold1987.1 : 81106 ... 99247 : + |
| To GenomeBrowser | scaffold1987.1:81106..99247 |
| Genes list of scaffold | scaffold1987.1 |
| Synonym | pfu_aug2.0_12870.1_03140 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1987.1_29935.t1 | 1 | 1 | Choline_transpo | 228 | 445 | 0.0 | 231.2 | 0.0 | 0.0 | 229.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1987.1_29935.t1 | gi|260828857|ref|XP_002609379.1| | hypothetical protein BRAFLDRAFT_86470 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1987.1_29935.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1987.1_29935.t1 atgatagccaatggcgaaaaattgaacttaggagatataaatcaggagttagacgacgaaccgacagaatatgattatgt ggacacgaaagatacaagcaaatacgcatttagatatggagacccgcgactgttgatatacccagttaactccgataatg aagtttgtggctacggcaaacaagtgggcaagccgtacttacatttctttgacatgatagaatgtggcaagatggggata ggtgtctttgtgaatggatgtcccacacctcaggtttgtgtttctgaatgtcccacagagaattgggtgtacatcgatac tataagcacagcatctgatcttaagttctgcaaggactctatcaacccagctacatcttctaagagtgtactgaacttag tcaaggatgaagattgtgctaggtacaccctgaaaagtaaatcattgataaacagatgtgtaccggagatcctgactgac ttccttgagggcgcggccagcctggcggaggggctcagtaacagtaatgttaatgccacgtcagcgagcggctctgatta cagcgtgtcagaaatagaatctggactagatatctatggaacatttctgaaggccaaggagtacgccgagaagataattg aggatgtcgtaacagcctggtggatgatacttataggtcttgtattgtctatgatatttgcctttatatggatcgtcatt atgcgatggattgccggcataatggtctggttcaccatatttgccttcattggcctatttggatttgtattcatcaacat acccatttctatcttttacagcttcaccttctacacccagatctacgctctgtttatgttgttctggttggttaactttg tcgttgccctgggccagatgactttagctggcgcgtttgcatcgtactactgggcatttaataagccgaaggatatccca gcattccctctgctcggctccttctggaggtaccatttaggttccctggcattcgggtctctaatcatagccatagtaca aattatcagagttatgttagaatatgtggaccataagctgaaaggatcagaaaatgctgtagctaaattcttcctgaaat gcttaaagtgttgcttttggtgtttagagaaattcctcaaatttctaaacaaaaatgcctatatcctgattgctgctcat ggcaaaaatttctgtacatctgcaaaaaatgcatttatgcttattatgagaaatattgtaagggttgtagtagtggacaa agtggccgatttcttgctcttaatcggaaagctggttgttgtcgcttttgcaggatag |
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Protein
| Protein ID | pfu_aug1.0_1987.1_29935.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1987.1_29935.t1 MIANGEKLNLGDINQELDDEPTEYDYVDTKDTSKYAFRYGDPRLLIYPVNSDNEVCGYGKQVGKPYLHFFDMIECGKMGI GVFVNGCPTPQVCVSECPTENWVYIDTISTASDLKFCKDSINPATSSKSVLNLVKDEDCARYTLKSKSLINRCVPEILTD FLEGAASLAEGLSNSNVNATSASGSDYSVSEIESGLDIYGTFLKAKEYAEKIIEDVVTAWWMILIGLVLSMIFAFIWIVI MRWIAGIMVWFTIFAFIGLFGFVFINIPISIFYSFTFYTQIYALFMLFWLVNFVVALGQMTLAGAFASYYWAFNKPKDIP AFPLLGSFWRYHLGSLAFGSLIIAIVQIIRVMLEYVDHKLKGSENAVAKFFLKCLKCCFWCLEKFLKFLNKNAYILIAAH GKNFCTSAKNAFMLIMRNIVRVVVVDKVADFLLLIGKLVVVAFAG |
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