Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1989.1_08195
Locus scaffold1989.1 : 1 ... 14955 : +
To GenomeBrowser scaffold1989.1:1..14955
Genes list of scaffold scaffold1989.1
Synonym pfu_aug2.0_403.1_10737

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_1989.1_08195.t1 1 1 UQ_con 33 87 2.1e-06 27.2 3.9e-10 2.9e-06 26.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_1989.1_08195.t1 gi|157131157|ref|XP_001662144.1| AAEL012011-PA [Aedes aegypti] 5.0e-24

Transcript
Transcript IDpfu_aug1.0_1989.1_08195.t1
Definition-
>pfu_aug1.0_1989.1_08195.t1
ggactacagtatgataaccctgtccaaaaagcttaaacaaggatctattaaaaaagaggcagatgaatcaaaaagaatct
ctgttcgggataaactccttgtgaaagaggttcaagagatggaagagaatttaccaaagacgtgctcagtgaactttgat
gatccgaatagactgaacagatttacagtaaatatagccccggatgaggggttctggaaaacgggcaaatttagatttac
tatcgatgttcctgaggaatataatatagtggatgggaacctactagaaagctcataa

Protein
Protein IDpfu_aug1.0_1989.1_08195.t1
Definition-
>pfu_aug1.0_1989.1_08195.t1
DYSMITLSKKLKQGSIKKEADESKRISVRDKLLVKEVQEMEENLPKTCSVNFDDPNRLNRFTVNIAPDEGFWKTGKFRFT
IDVPEEYNIVDGNLLESS

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