Gene
| Gene Model ID | pfu_aug1.0_19893.1_54619 |
|---|---|
| Locus | scaffold19893.1 : 19 ... 6827 : + |
| To GenomeBrowser | scaffold19893.1:19..6827 |
| Genes list of scaffold | scaffold19893.1 |
| Synonym | pfu_aug2.0_2029.1_32013 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_19893.1_54619.t1 | 3 | 1 | AAA_5 | 2 | 103 | 0.0 | 284.5 | 1.7e-22 | 1.2e-19 | 70.4 |
| pfu_aug1.0_19893.1_54619.t1 | 3 | 1 | Mg_chelatase | 280 | 310 | 3.7e-06 | 26.2 | 4.2e-05 | 0.028 | 13.5 |
| pfu_aug1.0_19893.1_54619.t1 | 3 | 2 | AAA_5 | 282 | 442 | 0.0 | 284.5 | 1.5e-33 | 9.8e-31 | 106.3 |
| pfu_aug1.0_19893.1_54619.t1 | 3 | 1 | AAA_16 | 282 | 351 | 1.8e-10 | 41.0 | 8.4e-07 | 0.00057 | 19.9 |
| pfu_aug1.0_19893.1_54619.t1 | 2 | 1 | AAA_22 | 284 | 327 | 1.9e-06 | 28.0 | 0.0001 | 0.071 | 13.2 |
| pfu_aug1.0_19893.1_54619.t1 | 2 | 1 | AAA_14 | 284 | 374 | 2.2e-06 | 27.5 | 3.2e-06 | 0.0022 | 17.9 |
| pfu_aug1.0_19893.1_54619.t1 | 3 | 2 | AAA_16 | 491 | 546 | 1.8e-10 | 41.0 | 0.55 | 370.0 | 0.9 |
| pfu_aug1.0_19893.1_54619.t1 | 3 | 2 | Mg_chelatase | 521 | 554 | 3.7e-06 | 26.2 | 0.51 | 350.0 | 0.2 |
| pfu_aug1.0_19893.1_54619.t1 | 3 | 3 | AAA_16 | 613 | 649 | 1.8e-10 | 41.0 | 0.00021 | 0.14 | 12.1 |
| pfu_aug1.0_19893.1_54619.t1 | 2 | 2 | AAA_22 | 614 | 692 | 1.9e-06 | 28.0 | 0.00043 | 0.29 | 11.2 |
| pfu_aug1.0_19893.1_54619.t1 | 3 | 3 | Mg_chelatase | 614 | 642 | 3.7e-06 | 26.2 | 0.0086 | 5.8 | 6.0 |
| pfu_aug1.0_19893.1_54619.t1 | 3 | 3 | AAA_5 | 615 | 757 | 0.0 | 284.5 | 1.1e-32 | 7.8e-30 | 103.4 |
| pfu_aug1.0_19893.1_54619.t1 | 2 | 2 | AAA_14 | 616 | 704 | 2.2e-06 | 27.5 | 0.028 | 19.0 | 5.1 |
| pfu_aug1.0_19893.1_54619.t1 | 1 | 1 | VWA_2 | 1282 | 1461 | 5.8e-08 | 33.0 | 1.9e-10 | 1.3e-07 | 31.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_19893.1_54619.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19893.1_54619.t1 atggaccaatctgctgtcaatgctgcactcaatggacggattctagttctggaaggaatcgagaaggctgagcgcaacgt cctgccaattctgaataatttgttggaaaacagagagatgcagctggatgatggtcgatttttgatggcggcagaaagat atgataagttattactagatcataggaaggaagaattagatgccatgaagttggtgagagtcagcgagagatttcgtgtg attgcccttggacatccagtcccaaggtacagggggaatgcactagatccaccattgcggtcaagatttcagtcccggga tgtcaatacaatgccgttcaaagagcaggtggaaatgctacaagaggtctttcagaagataccaacccagaaaatctcac agattgtatcgctgggtaccgctatcaatactaaggagtcgtctgctgttgggctgcctgactttcctctgtccaatgtt ccaaaagttgtgaagatactgaacagttcacctgacatgcctgcatctaaagtcatttcaagactgtatccgcatgaggt catgcttagcaaggaaggtagaacagcggtaggaaatctgttggagaaatttgacctgacagagaaagagtcttcttcaa tatttggtagtaaagatgaggtcatatctggtatagaaaagaaagacgagaactccagtgtagtaaagacaaacaaaaaa caaaaatttgttgtaccatccggactattgaacagtgcagatataagggaaccagaagtattcgtcccaacaaagtatca tcagggcttcctagctgaaatgatgcagtcacatctagcacatgacttttgtattgttggtccaagaggatgtggtaaga gtctgcttgtcaacagaatggctcagctattaggatacgaggtggaacagattatgctatatcaggacatgacatcaagg gatttgttacagcagaggattacacagcctaatggtgacactgactggaggttgtccccccttgttgaggcagctttaga gggtagactggcagtacttgatggggtacacagaataaatcagggctcatttgctgtcttacatagactcattcatgata gagagcttcaacttttcgatggtactcgactgatccatcatgatcgttttgaggcgatgaagcagaagtcagatttgaca acagaagcactgatggagaaaaagattcttccgattcatccctcatttagaatagcggctttatcagagcctcctgttcc tggcagctctagccagcaatggatgacaccagaacttcttacgatgtttttatttcaccatttacgtccactctccttag cagaagaaactcaggttgtacagaaagtagttccaggttgtcctgatatcaagaaattgatgaactttgtgcaccagatg cgcgagtcagcagaccccactatgatgtctatttcttcatcactgtctaccagacaaatcatcagagtggctaaacgact ggctaaattcccatctaaagatcttcatggtatcatccacaaagcttgcttggccaattttcttccaagtcttccaaaga taagcttggagcaagctttagaagctgctgagatccgagctcttaaaaactttgaggaaaatacagatactgatgaagca atcacttgtgaggtaagagatgggagtctcagaattggaaagacgtcagttcctgttttcaatcctgaaaatcgtactaa agtcccagacgttctgttctacgaaaatcctatgcatttgtcagtgatggaagacatgttgaaggactttgaccttggag aacatctactgttggtaggaaatcaaggagtggggaagaataaaattgtggacagattcttacacctgcttaatcgccct agagagtacattcagctccatagagatacaacagtacagactctcaccctacagcccctggttaaaggtggtgttatagt gtatgaggactctccgcttgtcagagctgtcaaagagggacatgtcctggttgttgatgaggcagacaaagcaccaactc acgtcacttgtattctgaaaactcttattgaaaccggtgaaatgcatcttgcagatggaagaaggattgtttcccaaaaa tcaggaattaagccatctccaagtgtcatcataggccatccagatttcagaatgattgtccttgcaaacagacctggttt tccttttctaggaaatgatttctttggtgccatgggggatatattcagttgtcatgcgattaataatccagatatgaaat cggagatgtctatgctaagaagatatggtccagatgtgccagaaacaacattggagaagctggtacaggcctttggagat ctcagaaatatggctgatcagggacttatatcatacccatactcaacacgtgaagtggttaacattgtgcgtcacttgaa taaatatcccaatgatggtctgagaactgtggtcagaaatgtgtttgattttgactcatatagcaaagaactacaagaaa ccattgtgaatactatgcaaaggcatggaatcccctttggctccacaaaggcagaagtcaatctagcacagcagtacccg ttgccgtcatttcaactgcaaggtgtctggaacattgcagggtctggcgatagacgtaggacggctccaataagcttgcc aatagagacgtcagagattgaccttagaggccctatagaaattgcagttcaggacaaagtaatagaaaggatgacagcta gagcaacgacattcacagaacaagaggcattctggactatacccatgcacgatacaaatatcatcagcgatgtagctgtt tctaaagccaccaacagtgcatcaagagatactgatattatccatattgctacagctaatcctatcagcatctactcttt gaatcccaagttgtcaacctgcacaatgctggacctatatgacatgtttccaaatgctcacggctcctacagaccaagag ttaagctggcaccaatggcagaacctcttgatcattcgttgctcttacatgaagaaatcaccaattctcttctcatggtc aacttcttgtcaggggatgtgactcgcatagtgtcccatgctttaccatccactccagtggaaaagagaaggtttccatc tgcaattcaacaaaacccaaatccgtatagaatgtgtccaagcacactaccagatgccaaaggaagcattatgttctacg agcttggaggggacaacattgtagctttgactggcatgtacacccaggccatgtcagtgccattcaaggtcaaggacatt catcaaattggcaacaaccagtggttactgaatgatctagagtcaaataagaagtttttcatggagttgaaaggattggg tggtcttggagggccgtacagacttgacagtggacacacagtgtaccaggtacctcaacatgagaaagatgccgtgccag aagaagtcagagaggccgcacgagaaatggcccagaaagctttcaaagagaggctacgggaaatcaacatgagcgaatat gatgctgatatgtacgattctttctctggcagcgtcagaagccaagtacagtcgctacgtgttatactcgacagtttgca ggcgaaaggaaaagagagacaatggttgaaaaatcagtcctatggagatttggatgactcaaaattaattgagggcatta ctggtgaaaagtcaatatacaagcgtagaggagagaaggaaccagaactgggtacacctcaggaaaaaccgaaacgtcta agattggtagtggatgtgtcaggaagtatgtataggtttaatggttacgatggaagactggaacgtgaaatggaatcgac tctcatgatgatggaagcgttagaaaagtatgaagaaaagtttaaatatgacgtgataggtcactcaggggaagactata aagtagaactagtcaagaaagataaaatacctcagaataacaaagaaagactgatcgtactgaaaacaatgcatgctcac tcacagttctgtataagtggtgacaatacgctccatgccactaagcatgccatagagaccctggctgaagaagaggctga cgaacatttcgtgatcatacttagtgacgccaattttgatcgctacggcatttcgccgcggaaattcggagagattttga aaggaaatgacaaagtgaatgcttacgccattttcataggatcattggaagaccaggctgatcagttgatcaaacaatta ccgatgggacattcttttgtttgcttggatacgaaatcattgcctcaaatccttcagcaaatcttcacgtctaccatgtt atctggtagataa |
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Protein
| Protein ID | pfu_aug1.0_19893.1_54619.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19893.1_54619.t1 MDQSAVNAALNGRILVLEGIEKAERNVLPILNNLLENREMQLDDGRFLMAAERYDKLLLDHRKEELDAMKLVRVSERFRV IALGHPVPRYRGNALDPPLRSRFQSRDVNTMPFKEQVEMLQEVFQKIPTQKISQIVSLGTAINTKESSAVGLPDFPLSNV PKVVKILNSSPDMPASKVISRLYPHEVMLSKEGRTAVGNLLEKFDLTEKESSSIFGSKDEVISGIEKKDENSSVVKTNKK QKFVVPSGLLNSADIREPEVFVPTKYHQGFLAEMMQSHLAHDFCIVGPRGCGKSLLVNRMAQLLGYEVEQIMLYQDMTSR DLLQQRITQPNGDTDWRLSPLVEAALEGRLAVLDGVHRINQGSFAVLHRLIHDRELQLFDGTRLIHHDRFEAMKQKSDLT TEALMEKKILPIHPSFRIAALSEPPVPGSSSQQWMTPELLTMFLFHHLRPLSLAEETQVVQKVVPGCPDIKKLMNFVHQM RESADPTMMSISSSLSTRQIIRVAKRLAKFPSKDLHGIIHKACLANFLPSLPKISLEQALEAAEIRALKNFEENTDTDEA ITCEVRDGSLRIGKTSVPVFNPENRTKVPDVLFYENPMHLSVMEDMLKDFDLGEHLLLVGNQGVGKNKIVDRFLHLLNRP REYIQLHRDTTVQTLTLQPLVKGGVIVYEDSPLVRAVKEGHVLVVDEADKAPTHVTCILKTLIETGEMHLADGRRIVSQK SGIKPSPSVIIGHPDFRMIVLANRPGFPFLGNDFFGAMGDIFSCHAINNPDMKSEMSMLRRYGPDVPETTLEKLVQAFGD LRNMADQGLISYPYSTREVVNIVRHLNKYPNDGLRTVVRNVFDFDSYSKELQETIVNTMQRHGIPFGSTKAEVNLAQQYP LPSFQLQGVWNIAGSGDRRRTAPISLPIETSEIDLRGPIEIAVQDKVIERMTARATTFTEQEAFWTIPMHDTNIISDVAV SKATNSASRDTDIIHIATANPISIYSLNPKLSTCTMLDLYDMFPNAHGSYRPRVKLAPMAEPLDHSLLLHEEITNSLLMV NFLSGDVTRIVSHALPSTPVEKRRFPSAIQQNPNPYRMCPSTLPDAKGSIMFYELGGDNIVALTGMYTQAMSVPFKVKDI HQIGNNQWLLNDLESNKKFFMELKGLGGLGGPYRLDSGHTVYQVPQHEKDAVPEEVREAAREMAQKAFKERLREINMSEY DADMYDSFSGSVRSQVQSLRVILDSLQAKGKERQWLKNQSYGDLDDSKLIEGITGEKSIYKRRGEKEPELGTPQEKPKRL RLVVDVSGSMYRFNGYDGRLEREMESTLMMMEALEKYEEKFKYDVIGHSGEDYKVELVKKDKIPQNNKERLIVLKTMHAH SQFCISGDNTLHATKHAIETLAEEEADEHFVIILSDANFDRYGISPRKFGEILKGNDKVNAYAIFIGSLEDQADQLIKQL PMGHSFVCLDTKSLPQILQQIFTSTMLSGR |
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