Gene
| Gene Model ID | pfu_aug1.0_199.1_36372 |
|---|---|
| Locus | scaffold199.1 : 25036 ... 57014 : + |
| To GenomeBrowser | scaffold199.1:25036..57014 |
| Genes list of scaffold | scaffold199.1 |
| Synonym | pfu_aug2.0_67.1_23374 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_199.1_36372.t1 | 1 | 1 | CO_deh_flav_C | 160 | 257 | 1.8e-16 | 59.9 | 1.1e-19 | 4.1e-16 | 58.7 |
| pfu_aug1.0_199.1_36372.t1 | 1 | 1 | Ald_Xan_dh_C | 288 | 382 | 4.0e-25 | 88.0 | 2.4e-28 | 8.8e-25 | 86.9 |
| pfu_aug1.0_199.1_36372.t1 | 2 | 1 | Ald_Xan_dh_C2 | 391 | 464 | 0.0 | 241.8 | 1.4e-15 | 5.1e-12 | 44.8 |
| pfu_aug1.0_199.1_36372.t1 | 2 | 2 | Ald_Xan_dh_C2 | 464 | 713 | 0.0 | 241.8 | 0.0 | 0.0 | 197.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_199.1_36372.t1 | gi|148667653|gb|EDL00070.1| | aldehyde oxidase 4 [Mus musculus] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_199.1_36372.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_199.1_36372.t1 atgggaactctcaaattatgttcttttgtgactcaagtctaccggacatcaaaggacacctacatgacagctattggaga acaaacagatttaaagaacagtgaattcagtccaaaccatgttactcaaaatgttatatttcctccagagttgacgagga gcagtgataaaacaatgaagattttcaaacatagttatttcctgcatactggtaaacttggtacatacactctcattgat ggcacaaaagttagtgaccttcaaaatatatgtgtcaaagacaattgtctggaaataggatctgctgttaccatggcaac actggaacagtttcttaaagaagttgaagggaaggaaaaggagtatcctctgtttaagaacttctttacgggaagattca agacttgtctgtcgtctgaagatgtcctgattaaagttaaaataccagagtttaaaaagaccaattgtcatattggattt tacaaacaagccgagcggaaaggatttgactatgcaatcgccaatgctgcttgcatgatacggttgagtgaacatactgt agatggagccactatctgtgtcggaggaatcagtgaccgaccagttatgttggaaaagactgaagaggccataaaaggaa agaaaaccgatgccttgagccttgatgttcaagaaatattgaaatcagccacacaggaagtatcaatgctgtgtaaagac aaatataaacaatcattggttaatggatttctgattaaatttctggaaagtataaccaaggacaagaaggaagccagtga ccctcatgagcccacacactggttagccccctgttctagcacccaggtgtttgaggatgctcctaccaatgagctgtacc taagcccagtctgctctttaaaagcccacgctaaaattgtcagtgtggatacaagtgaggcattgaaagaggcaggtgtc attggatactataaccatacagatgttataggacagaattggtttggacttattatgaaagacgaggaattgtttgcttc tgaggaggtacattgttacggacagatgattggtgtaattgcagcaacatcagaagcggtggccgttagagcagcaagac ttgtcaaagtgacgtatgaagaactgacacctatacttactattgaggatgccataaaagaaaattcttaccatccatat tctgctgcaccaattgaaaagggggaggtggatccagctttttccaaagtggagattgttgaggttggtgaagtcagtac cgggtcacaggaacatttctatttagagccgttatcaactgtcgctataccaaaaatggaggacggagaaatggaaatct tcttatcccatcagagtccaagttttctgcaggttggcttcgacaaagaaggtaacatatcagtagcagattttgacatt tactccaatgctggctattctactgatatctcccctgccgtgatgactaaaagtcttatgaccatagatggatgctacag tattccaaacatgagggtcaaaggtcacttgtgtaaaaccaacacacctacaaacactgcgttccgtggtttaggggctc cccaggcggtggtcggcacagaaaccatgatataccatgtagcaaaaaccgtgggcaaattgcaggaagagattcgtcag aaacatctgtataaagaaaatgatatcacactctgtaaaatggtaatggagaactgcaatgtccaaaaatgctgggaagc atgcaagaaacaatgccagtttgaacgtctgcaaagtgaagtcacaaaattcaatagactaattgtgatgtcatcaaatt ctatggaaaccttttgtaaaactcgaggaaataacagcacaaaatttcatgacgtcatgatggttttatgtcagggtctt gcactcatcaatgtatacttggacggcagtgtaaagctaactcacggaggatgtgaaattggacagggcctcaatacaaa catgatacaggtggcagcaagttgtttagggattccagttacaaaaatctacactggagataacagcacagatgttatag ccaatgctacggtaacaggagccagttctacatcagatatcattgctgtggctgtaacacaaggatatcagtataatatc aatacttggatgtgtgcacttatagatattgagtctttgcggaatacagagttttttccccttacagacagtatccgatg taaaaccattgtggcgtcatga |
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Protein
| Protein ID | pfu_aug1.0_199.1_36372.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_199.1_36372.t1 MGTLKLCSFVTQVYRTSKDTYMTAIGEQTDLKNSEFSPNHVTQNVIFPPELTRSSDKTMKIFKHSYFLHTGKLGTYTLID GTKVSDLQNICVKDNCLEIGSAVTMATLEQFLKEVEGKEKEYPLFKNFFTGRFKTCLSSEDVLIKVKIPEFKKTNCHIGF YKQAERKGFDYAIANAACMIRLSEHTVDGATICVGGISDRPVMLEKTEEAIKGKKTDALSLDVQEILKSATQEVSMLCKD KYKQSLVNGFLIKFLESITKDKKEASDPHEPTHWLAPCSSTQVFEDAPTNELYLSPVCSLKAHAKIVSVDTSEALKEAGV IGYYNHTDVIGQNWFGLIMKDEELFASEEVHCYGQMIGVIAATSEAVAVRAARLVKVTYEELTPILTIEDAIKENSYHPY SAAPIEKGEVDPAFSKVEIVEVGEVSTGSQEHFYLEPLSTVAIPKMEDGEMEIFLSHQSPSFLQVGFDKEGNISVADFDI YSNAGYSTDISPAVMTKSLMTIDGCYSIPNMRVKGHLCKTNTPTNTAFRGLGAPQAVVGTETMIYHVAKTVGKLQEEIRQ KHLYKENDITLCKMVMENCNVQKCWEACKKQCQFERLQSEVTKFNRLIVMSSNSMETFCKTRGNNSTKFHDVMMVLCQGL ALINVYLDGSVKLTHGGCEIGQGLNTNMIQVAASCLGIPVTKIYTGDNSTDVIANATVTGASSTSDIIAVAVTQGYQYNI NTWMCALIDIESLRNTEFFPLTDSIRCKTIVAS |
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