Gene
| Gene Model ID | pfu_aug1.0_19930.1_54623 |
|---|---|
| Locus | scaffold19930.1 : 2998 ... 9925 : + |
| To GenomeBrowser | scaffold19930.1:2998..9925 |
| Genes list of scaffold | scaffold19930.1 |
| Synonym | pfu_aug2.0_2240.1_02058 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_19930.1_54623.t1 | 1 | 1 | Carn_acyltransf | 6 | 208 | 0.0 | 242.4 | 0.0 | 0.0 | 242.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_19930.1_54623.t1 | gi|334321484|ref|XP_001370973.2| | PREDICTED: carnitine O-palmitoyltransferase 2, mitochondrial isoform X1 [Monodelphis domestica] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_19930.1_54623.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19930.1_54623.t1 atggacgactttttaattctaccagaattcctagatataaaattggatccgtacttaaaggataacataaagaaaggcaa ggaaacatttgacaagacaatggctacgttggacctacatcacttagaatatcagaaatataccaagaaatatgtcaaag ctcagaaattcagtccagattcactaatgcagcttgctatacagatggcctattataggcagtatggaaagactgtagcc acgtacgagtcatgtagtacggcagcatttaaacacggacgtacagagactatacggcctgcaacagaggctactaaaaa atgctgtgaaatgtttgttaacaagggaatcaattgtactgtagcagaattaaggcaggccttggatcagtgttcgcaga gacataatgaactcaccaaggaggcagctatgggtcaggggtttgacagacacctgtttgccctccatcatctagcacag agtcgagacgacattccagagatatttaaagattccacatatcacaaggtgaaccataacatcctatccacgtccaccat atcaagtcctgctgtattgataggaggatttgccccagtggtaccagacggttatggtgttggtaagtgtaccgtactaa tgttggaatga |
|
Protein
| Protein ID | pfu_aug1.0_19930.1_54623.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19930.1_54623.t1 MDDFLILPEFLDIKLDPYLKDNIKKGKETFDKTMATLDLHHLEYQKYTKKYVKAQKFSPDSLMQLAIQMAYYRQYGKTVA TYESCSTAAFKHGRTETIRPATEATKKCCEMFVNKGINCTVAELRQALDQCSQRHNELTKEAAMGQGFDRHLFALHHLAQ SRDDIPEIFKDSTYHKVNHNILSTSTISSPAVLIGGFAPVVPDGYGVGKCTVLMLE |
|