Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1995.1_22816
Locus scaffold1995.1 : 41716 ... 51825 : +
To GenomeBrowser scaffold1995.1:41716..51825
Genes list of scaffold scaffold1995.1
Synonym pfu_aug2.0_501.1_04257

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_1995.1_22816.t1 1 1 Mab-21 100 271 5.4e-29 101.2 4.7e-32 2.3e-28 99.1

Transcript
Transcript IDpfu_aug1.0_1995.1_22816.t1
Definition-
>pfu_aug1.0_1995.1_22816.t1
atgtaccgaaagacgcagcaggacgggaatgtggttgttttggtgattccaagtttccctattttacagaataatatcaa
caagtcaaccattcttctcatggaaacagatgaagtttcccctggatttgcgattgttaaatgtttggatgttgacacca
acgacacaaccatcttcagctctttagtattaagaggtagcgacctctatgtcaacagtaaacaaataagagagactttt
cagagtaccaatgcatcaagtggtcatggcccatgccaaacggattcatttttcggctttgacgccgatcgaacatatgc
actgaaatgcttggattggccgaaatcggcggtctcgttcgttagacgatcgcttgaaaggggatggccattgtacgatg
atgtgacagacatatgtggaaatggatgtttcctagttcccataaacagtaaacagcaacgttaccgcgatatatgggat
ctggaatggaggatatcatttacttttgcggagaaaaaaatggtatattccatgaatcactgtcagtttctttgttacgg
actttctaaattatttctgaatgacgttttgaaaaagactttcgcttgcgaggatttgttatgttcctatttcataaaat
ctgctgtcttttgggagatatcggaagatccaaacaattggtcatatttcaattttttatcaaagttctggaacgtattt
cgacgcttgataaactgggtcagtaaagggtactgtccaaattttttcataccagagaacaacatgttttacggaaagat
acatggagagaaacaaagaatgcttttgtcaacaatgcgagatctttatagggaaggatttcgatgtttactgcgctgta
cttccctgaacgaaactttatcaaaaatcttcacatacccagctgctgctttgatatgtgatgagaatgaacgtgcttca
atgtctacgatcgaaagggaaagacttaaaatcatattgactgctgacacactttctataagttctgcacaggaaaagag
gaagatcattgaatcgttacgaaacatgctaaccctagacacagactcagctgtaatgacgtctgctttaagtttaactg
ttgtcaacactgtgagaacgtatgccgaacatatattctttaaacatcagcatcgttacagtaacagcaaacgatactgt
gatataaaatcagctctttcgttgactcgaaaaacaaggacacatctacatatgaacaacctactttacgcaaaattaat
gttcatgacaggaaattaccatagaaccatagacatcctgcattacatcgctcaaaatctacgaactcagccacataagt
atgtatggactctaaatagagccttcattacggatatgttaacgcaagaaataacgtatagctcattcgtaaattcacac
atcttaaattgtgtaaagatagattgccttacagcaatagacgaacttaagttggaatgcgttgctgtacataaaacgtg
cggggaatcagtgctgtttataccgccccttgtgttcctgtacttcttgcttttccttagttatataagaattggcgaga
atcaaagaggatctgccgcaatggaggatatacgaacattatttgaacaatctgatggtcgtattcacattccgaaaatt
atgagagcagtgtcatgggaaatacttggaatatgtcaggaacagtttggttactataatgaagctctgcagtcatacag
ccaagctttggatgatgaacataacctctttaaggaagccacgctttgccgaatacttttgctcgagagcaatgaccatt
cttcaaattaa

Protein
Protein IDpfu_aug1.0_1995.1_22816.t1
Definition-
>pfu_aug1.0_1995.1_22816.t1
MYRKTQQDGNVVVLVIPSFPILQNNINKSTILLMETDEVSPGFAIVKCLDVDTNDTTIFSSLVLRGSDLYVNSKQIRETF
QSTNASSGHGPCQTDSFFGFDADRTYALKCLDWPKSAVSFVRRSLERGWPLYDDVTDICGNGCFLVPINSKQQRYRDIWD
LEWRISFTFAEKKMVYSMNHCQFLCYGLSKLFLNDVLKKTFACEDLLCSYFIKSAVFWEISEDPNNWSYFNFLSKFWNVF
RRLINWVSKGYCPNFFIPENNMFYGKIHGEKQRMLLSTMRDLYREGFRCLLRCTSLNETLSKIFTYPAAALICDENERAS
MSTIERERLKIILTADTLSISSAQEKRKIIESLRNMLTLDTDSAVMTSALSLTVVNTVRTYAEHIFFKHQHRYSNSKRYC
DIKSALSLTRKTRTHLHMNNLLYAKLMFMTGNYHRTIDILHYIAQNLRTQPHKYVWTLNRAFITDMLTQEITYSSFVNSH
ILNCVKIDCLTAIDELKLECVAVHKTCGESVLFIPPLVFLYFLLFLSYIRIGENQRGSAAMEDIRTLFEQSDGRIHIPKI
MRAVSWEILGICQEQFGYYNEALQSYSQALDDEHNLFKEATLCRILLLESNDHSSN

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495