Gene
| Gene Model ID | pfu_aug1.0_1999.1_44211 |
|---|---|
| Locus | scaffold1999.1 : 18642 ... 32865 : - |
| To GenomeBrowser | scaffold1999.1:18642..32865 |
| Genes list of scaffold | scaffold1999.1 |
| Synonym | pfu_aug2.0_15.1_16703 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1999.1_44211.t1 | 2 | 1 | Bromodomain | 33 | 92 | 1.10002e-41 | 140.6 | 7.0e-22 | 5.2e-18 | 64.7 |
| pfu_aug1.0_1999.1_44211.t1 | 2 | 2 | Bromodomain | 304 | 392 | 1.10002e-41 | 140.6 | 3.3e-26 | 2.5e-22 | 78.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1999.1_44211.t1 | gi|345488357|ref|XP_001603224.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| 8-16cell | 2 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 2 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1999.1_44211.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1999.1_44211.t1 atgntatgggctggtggtgactctgtacatcagagtccagtcaggcagaattctgtcaacgagtataacttcaccagtga ctctgaaaagtccgtcaaagatcataatccagattactacgatatcattaagcatccaatggatctgggaacaatcaaaa agaaacttgagaccaattactactactctgctacagaatgcattcatgatttcaatcaaatgttcaccaattgctacatc tacaacaatccaaaagaggatattgtattaatggctcaagttcttgagaagttgttcttgcagaaagtagcacagatgcc ctcagaggaaaaagaaatccttccgccatccaagaagacaccaaagtccaaaatgcctgtacctaagactcccgtgataa aggcctctgttcctgccatatccacaacaacgccacagatccctacatccactaccacacccaactctgtcccctctaca tcatcagctgcccccgttagtaaggaggccacacccaactcctctgtagccatagcaactcctgcagcctctactgtcat cacaaattctgagccggagatcaagccagcattctcatctacgtctatacccagtggtcttgacccaggagttgtacccc cagcacaacctacgaagactaaaagaggtgtgaaaaggaaagctgatacaaccactccagtagtagcttcttcccctagc gatccaacgtttgaaattcctgtgaaggtagagaagaaaataactttacctcagaaaatacctgcacgtagggaaagtta taatcgacagattaagaagcccaaacgagatttacctgaagagcaggtaggtgaccaggctcaacacagttcaaagcata aacataaaatgacagagcaactgaagtactgcaataaccttctgaaagaattgttctccaaaaagcaccagacctacgct tggccattttacaaaccagttgatgccgataatttaggacttcatgactatcatgatatcatcaaaaagcccatggattt aggttctataaagaaaaagatggattctcgggaatataggtcagccaatgattttgccatggatgtcagacttatatttt caaactgctatagatataatcctgcagatagtgacgtagttatgatggctagaaaactgcaggatgtttttgaagtgaaa tacgcgcgtatgcctgaggaatctgcgtcaccagaaggaaatgatctcaaagacgatagtgaaagtgacttatctgattt accggagtcagaatccgaggatgacgacagtgaaacagaaagggagcaaaagattaaggaactgcaggaaacgataaaga atcttacagaacagttatctagattgacagaggaacacatgcagaagttaaagcaaaagaaggaacgcaatgaaaataag aaagttttaaagaagaaaaaatcaaaagtgaaagaagacataaagagtagggataatgatatcagtgccacacctgtgtc tagtgtagtatcgaatgtgccacctatagtggacactacgaaaccttcaaaaacgcctaaaaataaggcgaataaaaaat ctccgtcggaaagtaaacggaaaaaaattacaaacaggactttgtctagtacaaagaaaagcaaagcttcttcaagtgct gtaggaacgttacctggaagttcaacgtttgatagtgatgatgaagacaatgctaaaccaatgacttatgatgaaaagcg acaattaagcttggatatcaataagttacctggtgacaaattgggtagagttgtgtatattattcaatccagagagccgt ccttacgagattccaatccagacgagattgagatagattttgagaccttgaagccctcaacacttcgagaattagaatcc tatgtcatgtcttgtctgaagaaaaataaaagaaagccatataccaagaaggcaacagggaaatccagagaagaggcaca aaaggagaagaaattagaattagagaaaatgttaaatgatgttcaagggcagctgggcagtgcaaaaaagccttccaaaa aagaggagagtgggaatgttgacgtggttggtgggtcgacacggttgagtgccagcagcagcagctcctcagggagtgac tcaagtagtgatagtagctcctccagctcctcagattccagtgactcagagtcagggaagggtaagaagccatga |
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Protein
| Protein ID | pfu_aug1.0_1999.1_44211.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1999.1_44211.t1 MXWAGGDSVHQSPVRQNSVNEYNFTSDSEKSVKDHNPDYYDIIKHPMDLGTIKKKLETNYYYSATECIHDFNQMFTNCYI YNNPKEDIVLMAQVLEKLFLQKVAQMPSEEKEILPPSKKTPKSKMPVPKTPVIKASVPAISTTTPQIPTSTTTPNSVPST SSAAPVSKEATPNSSVAIATPAASTVITNSEPEIKPAFSSTSIPSGLDPGVVPPAQPTKTKRGVKRKADTTTPVVASSPS DPTFEIPVKVEKKITLPQKIPARRESYNRQIKKPKRDLPEEQVGDQAQHSSKHKHKMTEQLKYCNNLLKELFSKKHQTYA WPFYKPVDADNLGLHDYHDIIKKPMDLGSIKKKMDSREYRSANDFAMDVRLIFSNCYRYNPADSDVVMMARKLQDVFEVK YARMPEESASPEGNDLKDDSESDLSDLPESESEDDDSETEREQKIKELQETIKNLTEQLSRLTEEHMQKLKQKKERNENK KVLKKKKSKVKEDIKSRDNDISATPVSSVVSNVPPIVDTTKPSKTPKNKANKKSPSESKRKKITNRTLSSTKKSKASSSA VGTLPGSSTFDSDDEDNAKPMTYDEKRQLSLDINKLPGDKLGRVVYIIQSREPSLRDSNPDEIEIDFETLKPSTLRELES YVMSCLKKNKRKPYTKKATGKSREEAQKEKKLELEKMLNDVQGQLGSAKKPSKKEESGNVDVVGGSTRLSASSSSSSGSD SSSDSSSSSSSDSSDSESGKGKKP |
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