Gene
| Gene Model ID | pfu_aug1.0_2.1_14608 |
|---|---|
| Locus | scaffold2.1 : 72777 ... 78795 : - |
| To GenomeBrowser | scaffold2.1:72777..78795 |
| Genes list of scaffold | scaffold2.1 |
| Synonym | pfu_aug2.0_561.1_04338 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2.1_14608.t1 | 2 | 1 | HAD_2 | 18 | 215 | 1.0e-21 | 77.9 | 3.6e-25 | 2.7e-21 | 76.5 |
| pfu_aug1.0_2.1_14608.t1 | 2 | 2 | HAD_2 | 242 | 270 | 1.0e-21 | 77.9 | 0.33 | 2500.0 | -1.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2.1_14608.t1 | gi|297172060|gb|ADI23043.1| | predicted phosphatase/phosphohexomutase [uncultured Planctomycetales bacterium HF0770_03I01] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2.1_14608.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2.1_14608.t1 atgaataaggccttcgcagcggccagatcttacagaggtccagtaaagggagtaattctggactggagcggcaccaccgc cgataaatacgtaatcgcacctgctgtcgtgttctacgaagtattcaaaaagcacaatgttccgatctcgatgcctgagg ctcggggaccaatgggattgaggaaagatcttcacatcaaagcaattaccgagattcctgaggtccggaaacgatggaag gatgtctacgggagagaaccaaatcagaaagacgtggacaacatgttcaaagatttcgtaccgatgcagctgagctgttt gaggaaatacacagatttgatcccgggaacaaccgatgcagtgaataggttaaagaatgagtttaaatgcaagatcggaa gtacgacgggttttacgcgatcaatggtggatgttttgctagaagacgcaaacaagcaagggtactttcccgatgttacg gttgcgggcgacgaagtcgagaacggcgctcgtccgaagccgcacatggtttataagaatatggatctattagatctcac acagattcagtccgtagttaaggttgacgacacggtttccggtgtaggcgaagctgtttccgccggatgctggggcgttg gcgttgcaagatatagtaactacatgggcattgacagcttagaagacatcggtaaactaactgcagatgaggaggaaaaa cgatgcgaacactcgcgagatttattgcgcaaagccggtgcgcattacgtcatcgacagcattaaagaccttccggaagt ggttgaggatatcaacaggcgtcttgcggatggcgagaagccgtaa |
|
Protein
| Protein ID | pfu_aug1.0_2.1_14608.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2.1_14608.t1 MNKAFAAARSYRGPVKGVILDWSGTTADKYVIAPAVVFYEVFKKHNVPISMPEARGPMGLRKDLHIKAITEIPEVRKRWK DVYGREPNQKDVDNMFKDFVPMQLSCLRKYTDLIPGTTDAVNRLKNEFKCKIGSTTGFTRSMVDVLLEDANKQGYFPDVT VAGDEVENGARPKPHMVYKNMDLLDLTQIQSVVKVDDTVSGVGEAVSAGCWGVGVARYSNYMGIDSLEDIGKLTADEEEK RCEHSRDLLRKAGAHYVIDSIKDLPEVVEDINRRLADGEKP |
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