Gene
| Gene Model ID | pfu_aug1.0_2.1_14613 |
|---|---|
| Locus | scaffold2.1 : 142236 ... 148240 : + |
| To GenomeBrowser | scaffold2.1:142236..148240 |
| Genes list of scaffold | scaffold2.1 |
| Synonym | pfu_aug2.0_561.1_04334 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2.1_14613.t1 | 3 | 1 | Ank_5 | 27 | 58 | 1.1e-14 | 54.1 | 0.00045 | 1.3 | 9.3 |
| pfu_aug1.0_2.1_14613.t1 | 4 | 1 | Ank | 35 | 56 | 5.8e-17 | 60.5 | 0.00097 | 2.9 | 7.8 |
| pfu_aug1.0_2.1_14613.t1 | 4 | 1 | Ank_3 | 36 | 59 | 5.7e-15 | 53.9 | 0.0095 | 28.0 | 5.3 |
| pfu_aug1.0_2.1_14613.t1 | 3 | 1 | Ank_4 | 36 | 77 | 2.0e-12 | 47.2 | 4.9e-05 | 0.15 | 12.6 |
| pfu_aug1.0_2.1_14613.t1 | 1 | 1 | Ank_2 | 39 | 132 | 2.0e-19 | 69.6 | 1.8e-22 | 5.3e-19 | 68.3 |
| pfu_aug1.0_2.1_14613.t1 | 3 | 2 | Ank_5 | 66 | 108 | 1.1e-14 | 54.1 | 1.2e-09 | 3.4e-06 | 27.0 |
| pfu_aug1.0_2.1_14613.t1 | 4 | 2 | Ank | 69 | 99 | 5.8e-17 | 60.5 | 9.2e-11 | 2.7e-07 | 30.0 |
| pfu_aug1.0_2.1_14613.t1 | 4 | 2 | Ank_3 | 69 | 96 | 5.7e-15 | 53.9 | 4.1e-08 | 0.00012 | 21.9 |
| pfu_aug1.0_2.1_14613.t1 | 3 | 2 | Ank_4 | 71 | 122 | 2.0e-12 | 47.2 | 3.0e-12 | 8.9e-09 | 35.6 |
| pfu_aug1.0_2.1_14613.t1 | 3 | 3 | Ank_5 | 88 | 140 | 1.1e-14 | 54.1 | 3.7e-10 | 1.1e-06 | 28.6 |
| pfu_aug1.0_2.1_14613.t1 | 4 | 3 | Ank | 102 | 132 | 5.8e-17 | 60.5 | 4.7e-07 | 0.0014 | 18.3 |
| pfu_aug1.0_2.1_14613.t1 | 4 | 3 | Ank_3 | 102 | 129 | 5.7e-15 | 53.9 | 2.5e-07 | 0.00075 | 19.5 |
| pfu_aug1.0_2.1_14613.t1 | 3 | 3 | Ank_4 | 115 | 141 | 2.0e-12 | 47.2 | 0.0049 | 15.0 | 6.2 |
| pfu_aug1.0_2.1_14613.t1 | 4 | 4 | Ank_3 | 135 | 165 | 5.7e-15 | 53.9 | 0.17 | 500.0 | 1.4 |
| pfu_aug1.0_2.1_14613.t1 | 4 | 4 | Ank | 155 | 166 | 5.8e-17 | 60.5 | 0.44 | 1300.0 | -0.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2.1_14613.t1 | gi|189501798|ref|YP_001957515.1| | 3.0e-13 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2.1_14613.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2.1_14613.t1 atgagcaaatattttgacgacgaattcacggacacagattcgatagggacgtgtcatgacatatcaattgatggaccaaa cgaaaatcagaatggcgtcagaggaaactcggagctcatgaggtacatagaggaaggtgacattgatgcggtggagctat tgatagaaacagatcccgggatcgttgtcatgcatgacagattgggtcagacagcgttgattctcgcagcggtacttggt gatttagatctggtaaaactacttgttgaaaatggggcaaatttagaccaaacggacttaacaggaaaaactgctcttct ccatgccatagagtcggaggcgtacgacattgttaattatctggtcagaggaggttcggatgtcaatgttgtggatcatt tgggtcaaagcgccctcttccttcttgcggcaacgcccacttctttgtcacgtgacatcgtcatggatattgttcaaaaa ttaataagagctggttattgcttgaagaaagacgaatattggatttcagaggaagcactcgttcgaccaaaaaaggattc cgccttcggaaaatttttcaagaaagtagaaacagttctcgcatttccttgtattggcgttgttcgaaacaaaaacactg aaaatattgtttcagttctgggcaacaaaacaaaacgttga |
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Protein
| Protein ID | pfu_aug1.0_2.1_14613.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2.1_14613.t1 MSKYFDDEFTDTDSIGTCHDISIDGPNENQNGVRGNSELMRYIEEGDIDAVELLIETDPGIVVMHDRLGQTALILAAVLG DLDLVKLLVENGANLDQTDLTGKTALLHAIESEAYDIVNYLVRGGSDVNVVDHLGQSALFLLAATPTSLSRDIVMDIVQK LIRAGYCLKKDEYWISEEALVRPKKDSAFGKFFKKVETVLAFPCIGVVRNKNTENIVSVLGNKTKR |
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