Gene
| Gene Model ID | pfu_aug1.0_20002.1_61957 |
|---|---|
| Locus | scaffold20002.1 : 5451 ... 9175 : - |
| To GenomeBrowser | scaffold20002.1:5451..9175 |
| Genes list of scaffold | scaffold20002.1 |
| Synonym | pfu_aug2.0_3841.1_05910 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_20002.1_61957.t1 | 2 | 1 | zf-B_box | 16 | 58 | 8.3e-15 | 54.4 | 1.9e-08 | 4.8e-05 | 23.1 |
| pfu_aug1.0_20002.1_61957.t1 | 2 | 2 | zf-B_box | 75 | 112 | 8.3e-15 | 54.4 | 1.1e-12 | 2.7e-09 | 36.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| 8-16cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_20002.1_61957.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20002.1_61957.t1 atgagtgacaacggagccacgtcgattcccccgctgactttcgtggagtgtggccaatgtaaagggaacgtcaacatatc atggttttgtaaaaactgtccttgctcactttgtgacacatgcgctaccgcccacaagacatctcaacaatacaaatccc acacagtcgttccacggacatacaccgtcctccgattgtacggtccggcaaaattagcagaacagtgtcacatccatccg gaaaaagaaatatcatcctactgcaatgattgcggcattccatgttgtgtcacatgtatggtgaacgatcataaacgtca cgacttctccaccatagaagacaagtacctagatgctgagaaaggccttaataagtactacagacagctgaacaccgaca tcagaccaacgcttgaaaaaatggaggaacaagctagagcggatgtcaaggaagatgacagccatattgagaaagtcata gataacattaatatttttcgcaaagatgttgttcaaaattttaatagagcatgtgatgatctcattgttcaggttcagtc gttttcaagtaaatcaaacgaagggttgaaagaaattgaaacctcactgaaaaatcttgaaatcataaagaaagaaattg aagaaaaaatagcgaaaggaaatttagacctaattaaatatacacctcccaaaatggatacacttgttcccaaattgaaa ggtccatcaaagtttgtcccaatgtttgtaccctctatgaatctgtttgatttgacgaaaaagccagttggaattattca gtcaaaagagatcaagaaagatgaaattaagagcagaaagataacaaatatcagatctgtacatgtacaaaaaatgactt catttaaaagtaagataggcgtcccatccatgaccacagcaggtaacaagctgacctgggttatggattgttggagtcct actatgtatctgtataacaatatgggtaaggttgtaaggtctgtgacagtggaaggtagtaggggcatcaatgacatggc aatcacaaagtcaggggaaatgatagtaacatgtggagacaagaaagtgaggcgtgtatcagtgagtggtaacgtgtcta cactgatagatactgcaccattgaactgtaaaggtgtgtgtctgactgacaaagaggagattgttgtgtgtttgagaggt cagggtgatcaaacccacgtgggtgtgtacacacctgatggacgtagtaagctacttgagatacagggtagggacggtaa ggagaaataccttgttactgatcctttccgtgtggtacggaatgatcaggatctttgcgtagttaattatatagaaaatg tggtatgtgtagatgagagagataatgtaaggtgggtatatgacggtaaggaagctaaactagggaattcatttggttca cgttgtatatgtgttgatcagtacaagaacctgctggtcactgatggaagtaacaactgtgtacattatatagataggga gggagggctgatacagttgataatgacacaggaacaaataggattacagtatcctcgggggatctgtgtagatgacgtaa caggacatgtctgggttggaactagttcggggaatgttgtcattgctaaatacttagaataa |
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Protein
| Protein ID | pfu_aug1.0_20002.1_61957.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20002.1_61957.t1 MSDNGATSIPPLTFVECGQCKGNVNISWFCKNCPCSLCDTCATAHKTSQQYKSHTVVPRTYTVLRLYGPAKLAEQCHIHP EKEISSYCNDCGIPCCVTCMVNDHKRHDFSTIEDKYLDAEKGLNKYYRQLNTDIRPTLEKMEEQARADVKEDDSHIEKVI DNINIFRKDVVQNFNRACDDLIVQVQSFSSKSNEGLKEIETSLKNLEIIKKEIEEKIAKGNLDLIKYTPPKMDTLVPKLK GPSKFVPMFVPSMNLFDLTKKPVGIIQSKEIKKDEIKSRKITNIRSVHVQKMTSFKSKIGVPSMTTAGNKLTWVMDCWSP TMYLYNNMGKVVRSVTVEGSRGINDMAITKSGEMIVTCGDKKVRRVSVSGNVSTLIDTAPLNCKGVCLTDKEEIVVCLRG QGDQTHVGVYTPDGRSKLLEIQGRDGKEKYLVTDPFRVVRNDQDLCVVNYIENVVCVDERDNVRWVYDGKEAKLGNSFGS RCICVDQYKNLLVTDGSNNCVHYIDREGGLIQLIMTQEQIGLQYPRGICVDDVTGHVWVGTSSGNVVIAKYLE |
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