Gene
| Gene Model ID | pfu_aug1.0_20034.1_33062 |
|---|---|
| Locus | scaffold20034.1 : 1 ... 8820 : + |
| To GenomeBrowser | scaffold20034.1:1..8820 |
| Genes list of scaffold | scaffold20034.1 |
| Synonym | pfu_aug2.0_1653.1_11790 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_20034.1_33062.t1 | 2 | 1 | Reprolysin_4 | 53 | 279 | 8.2e-13 | 48.3 | 1.1e-15 | 2.7e-12 | 46.6 |
| pfu_aug1.0_20034.1_33062.t1 | 2 | 1 | Reprolysin_5 | 53 | 251 | 5.0e-10 | 39.6 | 2.0e-13 | 5.0e-10 | 39.6 |
| pfu_aug1.0_20034.1_33062.t1 | 2 | 1 | Reprolysin | 54 | 73 | 7.1e-15 | 55.1 | 0.59 | 1500.0 | -1.4 |
| pfu_aug1.0_20034.1_33062.t1 | 2 | 1 | Reprolysin_2 | 71 | 99 | 2.1e-11 | 44.2 | 0.12 | 290.0 | 1.4 |
| pfu_aug1.0_20034.1_33062.t1 | 2 | 1 | Reprolysin_3 | 80 | 99 | 6.2e-11 | 42.8 | 0.11 | 280.0 | 2.0 |
| pfu_aug1.0_20034.1_33062.t1 | 2 | 2 | Reprolysin_3 | 143 | 234 | 6.2e-11 | 42.8 | 5.5e-14 | 1.4e-10 | 41.7 |
| pfu_aug1.0_20034.1_33062.t1 | 2 | 2 | Reprolysin | 145 | 292 | 7.1e-15 | 55.1 | 9.9e-18 | 2.4e-14 | 53.3 |
| pfu_aug1.0_20034.1_33062.t1 | 2 | 2 | Reprolysin_2 | 186 | 278 | 2.1e-11 | 44.2 | 8.2e-14 | 2.0e-10 | 40.9 |
| pfu_aug1.0_20034.1_33062.t1 | 2 | 2 | Reprolysin_5 | 334 | 416 | 5.0e-10 | 39.6 | 0.13 | 330.0 | 1.0 |
| pfu_aug1.0_20034.1_33062.t1 | 2 | 2 | Reprolysin_4 | 398 | 419 | 8.2e-13 | 48.3 | 0.57 | 1400.0 | -1.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_20034.1_33062.t1 | gi|324510272|gb|ADY44296.1| | 2.0e-28 |
Transcript
| Transcript ID | pfu_aug1.0_20034.1_33062.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20034.1_33062.t1 ccactgaggaggatttactattcgaaacacgtgtctggtacattaaaattcttcatgaagctacagaatcatcgaatttt catagaaaagagaatgatttattaaaggataactccaacatcagacatcgacgtcaagtggacattcaacaaccttacgt catcgatgtattagtcatcatagattacaaaatatatacaaaatggtacgagactacaacaggtgttgcattagagagag aacaggaaacaaaaactgaaatacatagctatttttcatatttcatgcatgaagtggggctccggtacgaaagcattgat agagctgatctgcgatttaaacttaaagttacgagcttcattttagcagatagtccccaagtgtttttggtaacagaagt tctaaaagaaccaaggtcatcaagggctatcttggacgccaatgaatgtctgagaagttttcggacttgggtaaacaaca cgtccggtttaccaccacacgatcatgctatgctttttacaggatatgatttgtacacgaagaaagacaatgcaaaacag ttacacactgcaggattggcttatatacgtacaatgtgtaagcatggcggagatagtgtgtccgtcgttgaggatcacgg tggattccaaaatgtaccaactgcagcccatgaaatcggacacagtcttggtgccagacatgacggggaggataatcttt gtagctctgacgatcattatatcatgcattcatccgactccgggacacaagtacctacagagaaacgagtcaaccaatgg catttctctcagtgctctcttgatgcttttagaagtttcattttcgagttgtcaagggagggctacacgtgcctaacaga aacctacgaggatatcacatcatccacgcccattggggttcctggacaagagtatgatcctgacgagcaatgccgaatga tctggggtcctcagtcctacctttgcaggggtgaggaattcggcaatgccagcaacatatgttcttctatgtactgtaga gaccctgacacagagaacgactgtgtactccatacagccgccaggggaacctcatgtggtaacaaaatggtacatgactg tatttattttcgtatcttattcataaaagatacagcgactgtgaacggtcaatcttgtcacgtttttgtgtcagcgcatg gacgccatgtttgttacgattctgctattcagtcatcttgctgtaaaagctgtagtgatgttatggattcaattaacgat gtaagaagatatttcaaaaagacaagctgtattgcatcagaattatctacgagaaggaagatatgcaagctgccatcgct taagtcgaattacacggacttgttccttcataaatgcttctcagatgttgtccaggaggttgaacgatgctctgttggag acaaatag |
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Protein
| Protein ID | pfu_aug1.0_20034.1_33062.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20034.1_33062.t1 TEEDLLFETRVWYIKILHEATESSNFHRKENDLLKDNSNIRHRRQVDIQQPYVIDVLVIIDYKIYTKWYETTTGVALERE QETKTEIHSYFSYFMHEVGLRYESIDRADLRFKLKVTSFILADSPQVFLVTEVLKEPRSSRAILDANECLRSFRTWVNNT SGLPPHDHAMLFTGYDLYTKKDNAKQLHTAGLAYIRTMCKHGGDSVSVVEDHGGFQNVPTAAHEIGHSLGARHDGEDNLC SSDDHYIMHSSDSGTQVPTEKRVNQWHFSQCSLDAFRSFIFELSREGYTCLTETYEDITSSTPIGVPGQEYDPDEQCRMI WGPQSYLCRGEEFGNASNICSSMYCRDPDTENDCVLHTAARGTSCGNKMVHDCIYFRILFIKDTATVNGQSCHVFVSAHG RHVCYDSAIQSSCCKSCSDVMDSINDVRRYFKKTSCIASELSTRRKICKLPSLKSNYTDLFLHKCFSDVVQEVERCSVGD K |
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