Gene
| Gene Model ID | pfu_aug1.0_2004.1_29939 |
|---|---|
| Locus | scaffold2004.1 : 5665 ... 26815 : - |
| To GenomeBrowser | scaffold2004.1:5665..26815 |
| Genes list of scaffold | scaffold2004.1 |
| Synonym | pfu_aug2.0_77.1_23390 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2004.1_29939.t1 | 1 | 1 | UQ_con | 5 | 141 | 0.0 | 174.3 | 0.0 | 0.0 | 174.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2004.1_29939.t1 | gi|330976894|gb|AEC48730.1| | ubiquitin-conjugating enzyme E2 b [Eriocheir sinensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 4 |
| egg-4cell | 1 |
| 8-16cell | 2 |
| egg-Dshape | 2 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 3 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2004.1_29939.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2004.1_29939.t1 atggcactaaagcgaataaataaggaactacaagacctgggcagagatcccccagcacagtgctctgcagggcctgtagg tgatgatttgttccactggcaagcaaccataatgggtccaccggacagtccctttcagggtggtgtatttttcctcacaa tacattttccaacagattaccctttcaagccacctaaggttgctttcacaacaagaatataccatcccaacataaacagt aacggcagtatttgtctggatattctacgttcacaatggtctccagctttaacgatttcaaaagttctcctttcaatatg ctccatgctgacagatccaaatccggatgatcctttggttccagaaattgcacgaatatacaaaactgataggtcaaaat acttagaacaggcgaaagaatggacaaagaagtatgccatgtag |
|
Protein
| Protein ID | pfu_aug1.0_2004.1_29939.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2004.1_29939.t1 MALKRINKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPDSPFQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS NGSICLDILRSQWSPALTISKVLLSICSMLTDPNPDDPLVPEIARIYKTDRSKYLEQAKEWTKKYAM |
|