Gene
| Gene Model ID | pfu_aug1.0_2004.1_29940 |
|---|---|
| Locus | scaffold2004.1 : 27816 ... 41962 : + |
| To GenomeBrowser | scaffold2004.1:27816..41962 |
| Genes list of scaffold | scaffold2004.1 |
| Synonym | pfu_aug2.0_1947.1_25217 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2004.1_29940.t1 | 1 | 1 | UQ_con | 5 | 141 | 0.0 | 179.3 | 0.0 | 0.0 | 179.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2004.1_29940.t1 | gi|24646906|ref|NP_731941.1| | effete, isoform A [Drosophila melanogaster] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| 8-16cell | 1 |
| egg-Dshape | 2 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2004.1_29940.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2004.1_29940.t1 atggctttaaaaaggataaataaggaacttcaagatctgaacaaagacccacctgcacaatgttctgcagggccagtagg ggatgacatgttccactggcaggcaacaatattgggcccaccagacagtccatatcagggtggtgtatttttcctgacaa tacattttcctacagattaccctttcaagcctccgaagctttcgttcacaacaaaaatataccatcctaacgtaaacagt aacggcagtatttgtctggatattttacgttcacaatggtctccagctctcacaatatcaaaagttcttctatcaataac gtcattgctcacagatccgaatccagatgatccattggttccagacatagcgcgcatatacaaaactgataggagtagat ataacgaatccgctaaagaatggaccagaaaatatgccatgtaa |
|
Protein
| Protein ID | pfu_aug1.0_2004.1_29940.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2004.1_29940.t1 MALKRINKELQDLNKDPPAQCSAGPVGDDMFHWQATILGPPDSPYQGGVFFLTIHFPTDYPFKPPKLSFTTKIYHPNVNS NGSICLDILRSQWSPALTISKVLLSITSLLTDPNPDDPLVPDIARIYKTDRSRYNESAKEWTRKYAM |
|