Gene
| Gene Model ID | pfu_aug1.0_20052.1_54630 |
|---|---|
| Locus | scaffold20052.1 : 1 ... 11963 : + |
| To GenomeBrowser | scaffold20052.1:1..11963 |
| Genes list of scaffold | scaffold20052.1 |
| Synonym | pfu_aug2.0_374.1_14068 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_20052.1_54630.t1 | 2 | 1 | Glyco_tranf_2_2 | 86 | 152 | 5.2e-06 | 25.7 | 0.00018 | 0.53 | 9.3 |
| pfu_aug1.0_20052.1_54630.t1 | 1 | 1 | Glycos_transf_2 | 103 | 159 | 3.3e-09 | 36.6 | 2.2e-12 | 6.6e-09 | 35.6 |
| pfu_aug1.0_20052.1_54630.t1 | 2 | 2 | Glyco_tranf_2_2 | 164 | 202 | 5.2e-06 | 25.7 | 4.3e-06 | 0.013 | 14.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_20052.1_54630.t1 | gi|170582702|ref|XP_001896248.1| | glycosyl transferase, group 2 family protein [Brugia malayi] | 5.0e-21 |
Transcript
| Transcript ID | pfu_aug1.0_20052.1_54630.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20052.1_54630.t1 acaaaaacgtttctttgattatcaagcttccgaagcttctcggtcgggtcatggagaaaaaggaactgctgttttgctac aggatgaggagaagaagcttgctgattctctgtttgaaaaggaagcatttaacattattgcaagtgataagatagcactt gacagatctgttgttgacgtcagagatctgagggcaaaatttgacattgttcattacatcatcgtcgcaaaaaaagaaac agctttaaaacatgaagaaaaaaaatatcgtcaaaaaccggttttcgaaaatgaataccgtgctgaactaggtgagaagt tgaggaagtatgtagcggagacctggccggaccagattgttaaaatcgtacgtaccaaggagaggagcggattaataagg gcacggttagcaggggccaaggcagctacaggggacgtactaatcttcctggactctcactgtgaagctaatacaggatg atcccccaccatggcaggaggtctatttgcagctagcagggagttcttcttcgagatcggagcctatgatgatggaatgg acgtatggggaggggaaaatctcgagatctccttcagggtgagtatcatggagatctaa |
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Protein
| Protein ID | pfu_aug1.0_20052.1_54630.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20052.1_54630.t1 QKRFFDYQASEASRSGHGEKGTAVLLQDEEKKLADSLFEKEAFNIIASDKIALDRSVVDVRDLRAKFDIVHYIIVAKKET ALKHEEKKYRQKPVFENEYRAELGEKLRKYVAETWPDQIVKIVRTKERSGLIRARLAGAKAATGDVLIFLDSHCEANTGX SPTMAGGLFAASREFFFEIGAYDDGMDVWGGENLEISFRVSIMEI |
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