Gene
Gene Model ID | pfu_aug1.0_20054.1_61964 |
---|---|
Locus | scaffold20054.1 : 12116 ... 33457 : + |
To GenomeBrowser | scaffold20054.1:12116..33457 |
Genes list of scaffold | scaffold20054.1 |
Synonym | pfu_aug2.0_5137.1_26036 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_20054.1_61964.t1 | 2 | 1 | C1q | 12 | 68 | 1.3e-11 | 44.6 | 5.6e-15 | 2.8e-11 | 43.5 |
pfu_aug1.0_20054.1_61964.t1 | 2 | 2 | C1q | 110 | 124 | 1.3e-11 | 44.6 | 0.48 | 2400.0 | -1.6 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 2 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_20054.1_61964.t1 |
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Definition | - |
>pfu_aug1.0_20054.1_61964.t1 atgaactctactaattcatggtggtcctctggtaaacttatattcaacaaagttatcttcaaccaaggcactgtttataa cctcacatccggggtatttactgctccctctagcggcgtctatgtcttctatgtttcaattacttcatatgacgacaacg acatcaaagtggacataactctaaacggaactcctctaaccacggcttggggcgtagaaattcgcgctaacaatgtgcgc acggtcgatttggacagatgtatggttgcaaataagctcaagcgtgacgaaagtcgagctttctctgtaattatcgatga caaagctgtgtatcaaatttcatttgatgcagaaaaagtccggaaaactgaatttttaaagtcatcaatgggcataactc ctaaacgaaaaacgaaaagcgcaaatctcgtgaaccgcgaaccagagtgtaaaagccatgaacgcaaaaaataa |
Protein
Protein ID | pfu_aug1.0_20054.1_61964.t1 |
---|---|
Definition | - |
>pfu_aug1.0_20054.1_61964.t1 MNSTNSWWSSGKLIFNKVIFNQGTVYNLTSGVFTAPSSGVYVFYVSITSYDDNDIKVDITLNGTPLTTAWGVEIRANNVR TVDLDRCMVANKLKRDESRAFSVIIDDKAVYQISFDAEKVRKTEFLKSSMGITPKRKTKSANLVNREPECKSHERKK |