Gene
| Gene Model ID | pfu_aug1.0_20054.1_61964 |
|---|---|
| Locus | scaffold20054.1 : 12116 ... 33457 : + |
| To GenomeBrowser | scaffold20054.1:12116..33457 |
| Genes list of scaffold | scaffold20054.1 |
| Synonym | pfu_aug2.0_5137.1_26036 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_20054.1_61964.t1 | 2 | 1 | C1q | 12 | 68 | 1.3e-11 | 44.6 | 5.6e-15 | 2.8e-11 | 43.5 |
| pfu_aug1.0_20054.1_61964.t1 | 2 | 2 | C1q | 110 | 124 | 1.3e-11 | 44.6 | 0.48 | 2400.0 | -1.6 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_20054.1_61964.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20054.1_61964.t1 atgaactctactaattcatggtggtcctctggtaaacttatattcaacaaagttatcttcaaccaaggcactgtttataa cctcacatccggggtatttactgctccctctagcggcgtctatgtcttctatgtttcaattacttcatatgacgacaacg acatcaaagtggacataactctaaacggaactcctctaaccacggcttggggcgtagaaattcgcgctaacaatgtgcgc acggtcgatttggacagatgtatggttgcaaataagctcaagcgtgacgaaagtcgagctttctctgtaattatcgatga caaagctgtgtatcaaatttcatttgatgcagaaaaagtccggaaaactgaatttttaaagtcatcaatgggcataactc ctaaacgaaaaacgaaaagcgcaaatctcgtgaaccgcgaaccagagtgtaaaagccatgaacgcaaaaaataa |
|
Protein
| Protein ID | pfu_aug1.0_20054.1_61964.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20054.1_61964.t1 MNSTNSWWSSGKLIFNKVIFNQGTVYNLTSGVFTAPSSGVYVFYVSITSYDDNDIKVDITLNGTPLTTAWGVEIRANNVR TVDLDRCMVANKLKRDESRAFSVIIDDKAVYQISFDAEKVRKTEFLKSSMGITPKRKTKSANLVNREPECKSHERKK |
|