Gene
| Gene Model ID | pfu_aug1.0_20082.1_61968 |
|---|---|
| Locus | scaffold20082.1 : 1 ... 10248 : - |
| To GenomeBrowser | scaffold20082.1:1..10248 |
| Genes list of scaffold | scaffold20082.1 |
| Synonym | pfu_aug2.0_89.1_30181 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_20082.1_61968.t1 | 2 | 1 | Na_Ca_ex | 28 | 53 | 1.1e-22 | 80.1 | 0.097 | 1400.0 | -1.3 |
| pfu_aug1.0_20082.1_61968.t1 | 2 | 2 | Na_Ca_ex | 58 | 145 | 1.1e-22 | 80.1 | 7.5e-27 | 1.1e-22 | 80.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_20082.1_61968.t1 | gi|321459376|gb|EFX70430.1| | hypothetical protein DAPPUDRAFT_309468 [Daphnia pulex] | 9.80909e-45 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_20082.1_61968.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20082.1_61968.t1 cttatcgagagcctgaggagccagattcagtgtttgccgtaccagagagttgctgtatgaagattgtgtggttcgtttgt ctaccgataaagtttcttctttacataaccatccccgactgccgttacaagcgatggaggaaatggtttatcgtcacgtt tatcatgtcgttagtttggctgtgtttattctcctacattatggtgtggatgatcactattataggttatacactaaaca taccagacactataatggccttgacctttgttgcctttggagtgagtctacctgatgtaatatctagtcttatcgtagtc agagaaggtttaggcgacatggcagtttccaatgctgtgggtagtaatgtatttgatatactcatttgtctgggagttcc ctggttattacagagtacaatcaggcagtctggtaaaccagtacaagtctatagtgaaggatgcagtgaaattatgaatt atagtaatcattga |
|
Protein
| Protein ID | pfu_aug1.0_20082.1_61968.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20082.1_61968.t1 YREPEEPDSVFAVPESCCMKIVWFVCLPIKFLLYITIPDCRYKRWRKWFIVTFIMSLVWLCLFSYIMVWMITIIGYTLNI PDTIMALTFVAFGVSLPDVISSLIVVREGLGDMAVSNAVGSNVFDILICLGVPWLLQSTIRQSGKPVQVYSEGCSEIMNY SNH |
|