Gene
| Gene Model ID | pfu_aug1.0_20084.1_04067 |
|---|---|
| Locus | scaffold20084.1 : 15786 ... 19960 : + |
| To GenomeBrowser | scaffold20084.1:15786..19960 |
| Genes list of scaffold | scaffold20084.1 |
| Synonym | pfu_aug2.0_139.1_30279 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_20084.1_04067.t1 | 1 | 1 | Ank_2 | 16 | 111 | 1.1e-13 | 51.2 | 5.7e-17 | 1.4e-13 | 50.9 |
| pfu_aug1.0_20084.1_04067.t1 | 2 | 1 | Ank_4 | 18 | 59 | 9.6e-11 | 41.8 | 2.3e-05 | 0.057 | 13.9 |
| pfu_aug1.0_20084.1_04067.t1 | 3 | 1 | Ank_3 | 19 | 36 | 2.9e-08 | 33.1 | 0.97 | 2400.0 | -0.7 |
| pfu_aug1.0_20084.1_04067.t1 | 3 | 1 | Ank | 20 | 35 | 2.0e-13 | 49.3 | 0.43 | 1100.0 | -0.3 |
| pfu_aug1.0_20084.1_04067.t1 | 2 | 1 | Ank_5 | 41 | 78 | 8.0e-10 | 38.6 | 6.3e-07 | 0.0016 | 18.6 |
| pfu_aug1.0_20084.1_04067.t1 | 3 | 2 | Ank | 48 | 78 | 2.0e-13 | 49.3 | 3.6e-09 | 8.8e-06 | 25.2 |
| pfu_aug1.0_20084.1_04067.t1 | 3 | 2 | Ank_3 | 48 | 75 | 2.9e-08 | 33.1 | 6.3e-07 | 0.0016 | 18.5 |
| pfu_aug1.0_20084.1_04067.t1 | 2 | 2 | Ank_4 | 55 | 100 | 9.6e-11 | 41.8 | 1.2e-10 | 3.1e-07 | 30.7 |
| pfu_aug1.0_20084.1_04067.t1 | 2 | 2 | Ank_5 | 67 | 111 | 8.0e-10 | 38.6 | 1.3e-08 | 3.1e-05 | 24.0 |
| pfu_aug1.0_20084.1_04067.t1 | 3 | 3 | Ank | 81 | 111 | 2.0e-13 | 49.3 | 1.2e-07 | 0.00029 | 20.4 |
| pfu_aug1.0_20084.1_04067.t1 | 3 | 3 | Ank_3 | 81 | 105 | 2.9e-08 | 33.1 | 0.00014 | 0.35 | 11.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_20084.1_04067.t1 | gi|115754769|ref|XP_784222.2| | PREDICTED: ankyrin repeat and EF-hand domain-containing protein 1 [Strongylocentrotus purpuratus] | 4.0e-37 |
Transcript
| Transcript ID | pfu_aug1.0_20084.1_04067.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20084.1_04067.t1 atgcctgtagcacagacaagacttgagattttgcaagtttgcaaacttcttcaatgtgtaagagaaaagaatacggagca gattcagaaactgacttctcatggagtacctcatcttgtcaattataatgattctgaggaaggattcacggctcttgggg tggcggcagcagctaatgatgacgagatgatcgattttctgattgagctcggagcccatccggatgctgtagatttgaag ggaagatctccatcaatgagagctgcagagtttggtcatacacaatgtatggagagactggtgaaagctggggcaaagat ggatattaaagatttggagggaaaag |
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Protein
| Protein ID | pfu_aug1.0_20084.1_04067.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20084.1_04067.t1 MPVAQTRLEILQVCKLLQCVREKNTEQIQKLTSHGVPHLVNYNDSEEGFTALGVAAAANDDEMIDFLIELGAHPDAVDLK GRSPSMRAAEFGHTQCMERLVKAGAKMDIKDLEGK |
|