Gene
| Gene Model ID | pfu_aug1.0_2009.1_00926 |
|---|---|
| Locus | scaffold2009.1 : 9381 ... 25255 : - |
| To GenomeBrowser | scaffold2009.1:9381..25255 |
| Genes list of scaffold | scaffold2009.1 |
| Synonym | pfu_aug2.0_416.1_20746 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2009.1_00926.t1 | 2 | 1 | Tom37_C | 92 | 145 | 1.3e-13 | 51.1 | 4.4e-11 | 1.3e-07 | 31.6 |
| pfu_aug1.0_2009.1_00926.t1 | 2 | 2 | Tom37_C | 168 | 217 | 1.3e-13 | 51.1 | 8.9e-07 | 0.0026 | 17.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2009.1_00926.t1 | gi|72176641|ref|XP_790728.1| | PREDICTED: metaxin-1 [Strongylocentrotus purpuratus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2009.1_00926.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2009.1_00926.t1 atgggccctccaactatcggaacttcagaatacttggcggacacactgttaaagacggtatggccggattgcaaagctta ctgtaaattttctggaactccagtcaagatccttcgaggaaataatccatacaaatcgccatcaggtggtctgcctatat tgcatcataatggatgtcgggaaggaacagtatcaagtatcttgacatatcttcacaggcagaactggggagctgatatt aatgtgaattcgaaagaacaagcagatatcaaagctttcacagctttgataaaagaaaaacttcacccagcatttcttca cagctggtggttggatgaaaaagcttatgatgagaccacacaaccttggtttgccaaaacctgttcatttcctagaagtt tatatttccctaaaagaatgaaagcaactgctacaattacagtgtatacaccaagattcacatctactattagggaaaaa gatatagatcaaatgatatacaaggagtcaaaggagtgtctcaatttattgtcatcaaagcttggagaaaatgacttctt tcttggtaaaaggccttgctctctggatgccctggtcttcggttatcttgcacccttactaaagggaccacttcaaaaca accaacttgtgatacatctaaataacacaccaaatttatgtgccctttgtaacagaattctttcaaggttctttcctgtt tctccagaagatttagaagaaaagagaaaaagggaacaagaaagacttgaagctatgcaggcagatgcgttagagtttcc aaacaaaaggaggaatatgatcttggcaggaatatttgcagtgactgctatgattgctttcacattgactcatggactta taaacatcgaaagtcagaaatctccggaccattcagaagaagatgttttagatgatatgtttgaatttgaagatcatgaa ggaggagaggaatag |
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Protein
| Protein ID | pfu_aug1.0_2009.1_00926.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2009.1_00926.t1 MGPPTIGTSEYLADTLLKTVWPDCKAYCKFSGTPVKILRGNNPYKSPSGGLPILHHNGCREGTVSSILTYLHRQNWGADI NVNSKEQADIKAFTALIKEKLHPAFLHSWWLDEKAYDETTQPWFAKTCSFPRSLYFPKRMKATATITVYTPRFTSTIREK DIDQMIYKESKECLNLLSSKLGENDFFLGKRPCSLDALVFGYLAPLLKGPLQNNQLVIHLNNTPNLCALCNRILSRFFPV SPEDLEEKRKREQERLEAMQADALEFPNKRRNMILAGIFAVTAMIAFTLTHGLINIESQKSPDHSEEDVLDDMFEFEDHE GGEE |
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