Gene
| Gene Model ID | pfu_aug1.0_20108.1_61969 |
|---|---|
| Locus | scaffold20108.1 : 1 ... 10238 : + |
| To GenomeBrowser | scaffold20108.1:1..10238 |
| Genes list of scaffold | scaffold20108.1 |
| Synonym | pfu_aug2.0_862.1_07962 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_20108.1_61969.t1 | 13 | 1 | zf-H2C2_2 | 182 | 192 | 1.5e-21 | 75.5 | 0.062 | 190.0 | 2.6 |
| pfu_aug1.0_20108.1_61969.t1 | 12 | 1 | zf-C2H2 | 186 | 209 | 2.5e-21 | 74.6 | 0.00059 | 1.7 | 9.1 |
| pfu_aug1.0_20108.1_61969.t1 | 13 | 1 | zf-C2H2_4 | 186 | 209 | 2.7e-16 | 58.6 | 0.017 | 50.0 | 4.5 |
| pfu_aug1.0_20108.1_61969.t1 | 10 | 1 | zf-C2H2_jaz | 186 | 197 | 3.8e-12 | 45.9 | 0.01 | 30.0 | 4.9 |
| pfu_aug1.0_20108.1_61969.t1 | 13 | 2 | zf-H2C2_2 | 204 | 223 | 1.5e-21 | 75.5 | 0.0019 | 5.7 | 7.4 |
| pfu_aug1.0_20108.1_61969.t1 | 12 | 2 | zf-C2H2 | 215 | 233 | 2.5e-21 | 74.6 | 0.031 | 92.0 | 3.6 |
| pfu_aug1.0_20108.1_61969.t1 | 13 | 2 | zf-C2H2_4 | 215 | 235 | 2.7e-16 | 58.6 | 0.036 | 110.0 | 3.5 |
| pfu_aug1.0_20108.1_61969.t1 | 10 | 2 | zf-C2H2_jaz | 215 | 233 | 3.8e-12 | 45.9 | 2.5e-05 | 0.073 | 13.2 |
| pfu_aug1.0_20108.1_61969.t1 | 13 | 3 | zf-H2C2_2 | 239 | 256 | 1.5e-21 | 75.5 | 0.0029 | 8.7 | 6.8 |
| pfu_aug1.0_20108.1_61969.t1 | 12 | 3 | zf-C2H2 | 247 | 269 | 2.5e-21 | 74.6 | 0.0015 | 4.3 | 7.8 |
| pfu_aug1.0_20108.1_61969.t1 | 13 | 3 | zf-C2H2_4 | 247 | 269 | 2.7e-16 | 58.6 | 0.001 | 3.1 | 8.3 |
| pfu_aug1.0_20108.1_61969.t1 | 13 | 4 | zf-H2C2_2 | 262 | 288 | 1.5e-21 | 75.5 | 0.0056 | 17.0 | 5.9 |
| pfu_aug1.0_20108.1_61969.t1 | 12 | 4 | zf-C2H2 | 278 | 300 | 2.5e-21 | 74.6 | 4.7e-05 | 0.14 | 12.5 |
| pfu_aug1.0_20108.1_61969.t1 | 13 | 4 | zf-C2H2_4 | 279 | 298 | 2.7e-16 | 58.6 | 0.0016 | 4.8 | 7.7 |
| pfu_aug1.0_20108.1_61969.t1 | 10 | 3 | zf-C2H2_jaz | 279 | 297 | 3.8e-12 | 45.9 | 0.0056 | 17.0 | 5.7 |
| pfu_aug1.0_20108.1_61969.t1 | 13 | 5 | zf-H2C2_2 | 292 | 318 | 1.5e-21 | 75.5 | 1.4e-05 | 0.043 | 14.1 |
| pfu_aug1.0_20108.1_61969.t1 | 12 | 5 | zf-C2H2 | 308 | 327 | 2.5e-21 | 74.6 | 0.019 | 58.0 | 4.3 |
| pfu_aug1.0_20108.1_61969.t1 | 13 | 5 | zf-C2H2_4 | 308 | 329 | 2.7e-16 | 58.6 | 0.00011 | 0.33 | 11.3 |
| pfu_aug1.0_20108.1_61969.t1 | 10 | 4 | zf-C2H2_jaz | 308 | 325 | 3.8e-12 | 45.9 | 4.3e-05 | 0.13 | 12.4 |
| pfu_aug1.0_20108.1_61969.t1 | 13 | 6 | zf-H2C2_2 | 324 | 344 | 1.5e-21 | 75.5 | 0.011 | 34.0 | 4.9 |
| pfu_aug1.0_20108.1_61969.t1 | 12 | 6 | zf-C2H2 | 334 | 352 | 2.5e-21 | 74.6 | 3.4e-06 | 0.01 | 16.1 |
| pfu_aug1.0_20108.1_61969.t1 | 13 | 6 | zf-C2H2_4 | 334 | 352 | 2.7e-16 | 58.6 | 0.00068 | 2.0 | 8.9 |
| pfu_aug1.0_20108.1_61969.t1 | 13 | 7 | zf-H2C2_2 | 363 | 374 | 1.5e-21 | 75.5 | 0.001 | 3.1 | 8.2 |
| pfu_aug1.0_20108.1_61969.t1 | 12 | 7 | zf-C2H2 | 365 | 386 | 2.5e-21 | 74.6 | 4.9e-05 | 0.15 | 12.5 |
| pfu_aug1.0_20108.1_61969.t1 | 13 | 7 | zf-C2H2_4 | 365 | 386 | 2.7e-16 | 58.6 | 7.5e-05 | 0.22 | 11.9 |
| pfu_aug1.0_20108.1_61969.t1 | 10 | 5 | zf-C2H2_jaz | 365 | 383 | 3.8e-12 | 45.9 | 7.7e-06 | 0.023 | 14.8 |
| pfu_aug1.0_20108.1_61969.t1 | 13 | 8 | zf-H2C2_2 | 380 | 403 | 1.5e-21 | 75.5 | 0.00062 | 1.8 | 8.9 |
| pfu_aug1.0_20108.1_61969.t1 | 10 | 6 | zf-C2H2_jaz | 394 | 417 | 3.8e-12 | 45.9 | 2.0e-07 | 0.00059 | 19.8 |
| pfu_aug1.0_20108.1_61969.t1 | 12 | 8 | zf-C2H2 | 395 | 417 | 2.5e-21 | 74.6 | 0.0004 | 1.2 | 9.6 |
| pfu_aug1.0_20108.1_61969.t1 | 13 | 8 | zf-C2H2_4 | 395 | 417 | 2.7e-16 | 58.6 | 0.00018 | 0.52 | 10.7 |
| pfu_aug1.0_20108.1_61969.t1 | 13 | 9 | zf-H2C2_2 | 410 | 435 | 1.5e-21 | 75.5 | 3.1e-06 | 0.0091 | 16.2 |
| pfu_aug1.0_20108.1_61969.t1 | 12 | 9 | zf-C2H2 | 425 | 448 | 2.5e-21 | 74.6 | 2.1e-06 | 0.0061 | 16.8 |
| pfu_aug1.0_20108.1_61969.t1 | 13 | 9 | zf-C2H2_4 | 425 | 448 | 2.7e-16 | 58.6 | 0.0013 | 4.0 | 7.9 |
| pfu_aug1.0_20108.1_61969.t1 | 10 | 7 | zf-C2H2_jaz | 425 | 446 | 3.8e-12 | 45.9 | 0.1 | 310.0 | 1.7 |
| pfu_aug1.0_20108.1_61969.t1 | 13 | 10 | zf-H2C2_2 | 439 | 465 | 1.5e-21 | 75.5 | 3.7e-05 | 0.11 | 12.8 |
| pfu_aug1.0_20108.1_61969.t1 | 12 | 10 | zf-C2H2 | 454 | 477 | 2.5e-21 | 74.6 | 1.4e-07 | 0.0004 | 20.5 |
| pfu_aug1.0_20108.1_61969.t1 | 10 | 8 | zf-C2H2_jaz | 454 | 474 | 3.8e-12 | 45.9 | 0.0041 | 12.0 | 6.1 |
| pfu_aug1.0_20108.1_61969.t1 | 13 | 10 | zf-C2H2_4 | 455 | 477 | 2.7e-16 | 58.6 | 4.1e-06 | 0.012 | 15.8 |
| pfu_aug1.0_20108.1_61969.t1 | 13 | 11 | zf-H2C2_2 | 468 | 492 | 1.5e-21 | 75.5 | 1.1e-10 | 3.3e-07 | 30.2 |
| pfu_aug1.0_20108.1_61969.t1 | 12 | 11 | zf-C2H2 | 483 | 506 | 2.5e-21 | 74.6 | 0.0004 | 1.2 | 9.6 |
| pfu_aug1.0_20108.1_61969.t1 | 13 | 11 | zf-C2H2_4 | 483 | 506 | 2.7e-16 | 58.6 | 0.00014 | 0.4 | 11.1 |
| pfu_aug1.0_20108.1_61969.t1 | 10 | 9 | zf-C2H2_jaz | 483 | 503 | 3.8e-12 | 45.9 | 0.0015 | 4.4 | 7.5 |
| pfu_aug1.0_20108.1_61969.t1 | 13 | 12 | zf-H2C2_2 | 499 | 520 | 1.5e-21 | 75.5 | 0.18 | 530.0 | 1.2 |
| pfu_aug1.0_20108.1_61969.t1 | 13 | 12 | zf-C2H2_4 | 512 | 533 | 2.7e-16 | 58.6 | 2.1e-05 | 0.064 | 13.6 |
| pfu_aug1.0_20108.1_61969.t1 | 10 | 10 | zf-C2H2_jaz | 512 | 529 | 3.8e-12 | 45.9 | 0.0025 | 7.4 | 6.8 |
| pfu_aug1.0_20108.1_61969.t1 | 12 | 12 | zf-C2H2 | 513 | 533 | 2.5e-21 | 74.6 | 2.4e-05 | 0.072 | 13.4 |
| pfu_aug1.0_20108.1_61969.t1 | 13 | 13 | zf-H2C2_2 | 525 | 549 | 1.5e-21 | 75.5 | 0.00026 | 0.78 | 10.1 |
| pfu_aug1.0_20108.1_61969.t1 | 13 | 13 | zf-C2H2_4 | 543 | 550 | 2.7e-16 | 58.6 | 0.61 | 1800.0 | -0.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_20108.1_61969.t1 | gi|309269981|ref|XP_984201.3| | 3.0e-38 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_20108.1_61969.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20108.1_61969.t1 tggactgaagaggacaaaccgacagatttgagctccgatatcaatgatgggatagacctgccagaaaaagtatacagtaa ctttcaaggaactgaattcaggtcagaggaaatcgacagtaactttcaaggaaatgaattcagaccagaggaaatcgacg taaaacctgatatctcatcagaaaacaggcatgatattttcccaatggaaagtaattcgtcaaaactagtttgtaatgat ttatatcaaaataaaccaaaatcatcaaagaaaaaaagaaaagcaaaaacagagaagaaaaagaagggaaagaagaattg taagtctggagaaagtactgttccgaaaataaacatattattaagtgattcgtcagatgacactaaaaggcaagagaagt tagaagagaatttatgccctcctagtagacagaccttaatgagatggtctcgtggcggaaagcaagccacactagcacag caactagctgcccaaaacaggcaatataatagcagaatgaaagaaccaaaagtagacaaagatggtaatagatactatga gtgtgagatctgtggaatacactacatcagctataaagagacaatcgcccattacagaaaggatcacatgttaagtaggt cattcccttgtaaggaatgtgataaagttctccacaccaggaatgtctggctgtatcacactgaaaacaaacacagcaat cattcccagagaaatttgtttcactgtgaaaaatgcctgtcttcatttttctattccagccgtttgaaggttcatcaaaa aaattgtaaggggtctggcattgaggttattacgtgtaatttatgtggagatatgtttgttcatgacgtattacttcaaa accatatcaagctgacgcattctgggattgatgccaaaatcaaatgccgacactgtgatctttggtttaaatctgaggag gaaatgacgaaacatgcggaagatcatcaaagttcttcataccaatgtcggtattgtaaagaatgcttttcatctaatga tgaattgatacaacatggaaactgtcttaataagatcaaatctttacctctaaaatgtgaattatgcggtaagaatttca agaagttcaaattctacagaagtcacatgttactacatgtcaaaactaacacaaaagcaaagtttgaatgtgaaatatgt aataaagaatgcatcagtgaaaaaggctacagacgtcacaaactcagccatttacctaatgcagaaaaaccttttcattg tgaagaatgtgggcaaggatttgttgttcagacagacctgaaatttcacatcaagacgttccatgatcgtaagagtgact tcatgtgtgagatttgtggtcgggcatataactacagccgttctttgactgcccatatcaggagggtgcatacaggtgaa aaaccattcaaatgtgatgtttgtcaagaagccttcttcacaaacagagcaatggagtaccacaagaagaatactcactt agttacagaaaacatatgtgaggtatgtgggaagaaatgtccgtcatccgaggccctgagaattcatcagtatcatcata aaaagatatcaaacaggaaggaggtccagtgtgatcagtgtaataaaatccttccct |
|
Protein
| Protein ID | pfu_aug1.0_20108.1_61969.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20108.1_61969.t1 WTEEDKPTDLSSDINDGIDLPEKVYSNFQGTEFRSEEIDSNFQGNEFRPEEIDVKPDISSENRHDIFPMESNSSKLVCND LYQNKPKSSKKKRKAKTEKKKKGKKNCKSGESTVPKINILLSDSSDDTKRQEKLEENLCPPSRQTLMRWSRGGKQATLAQ QLAAQNRQYNSRMKEPKVDKDGNRYYECEICGIHYISYKETIAHYRKDHMLSRSFPCKECDKVLHTRNVWLYHTENKHSN HSQRNLFHCEKCLSSFFYSSRLKVHQKNCKGSGIEVITCNLCGDMFVHDVLLQNHIKLTHSGIDAKIKCRHCDLWFKSEE EMTKHAEDHQSSSYQCRYCKECFSSNDELIQHGNCLNKIKSLPLKCELCGKNFKKFKFYRSHMLLHVKTNTKAKFECEIC NKECISEKGYRRHKLSHLPNAEKPFHCEECGQGFVVQTDLKFHIKTFHDRKSDFMCEICGRAYNYSRSLTAHIRRVHTGE KPFKCDVCQEAFFTNRAMEYHKKNTHLVTENICEVCGKKCPSSEALRIHQYHHKKISNRKEVQCDQCNKILP |
|