Gene
| Gene Model ID | pfu_aug1.0_2013.1_22831 |
|---|---|
| Locus | scaffold2013.1 : 11408 ... 21695 : - |
| To GenomeBrowser | scaffold2013.1:11408..21695 |
| Genes list of scaffold | scaffold2013.1 |
| Synonym | pfu_aug2.0_37.1_23298 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2013.1_22831.t1 | 3 | 1 | WD40 | 232 | 258 | 2.4e-22 | 77.9 | 0.00073 | 2.7 | 8.0 |
| pfu_aug1.0_2013.1_22831.t1 | 3 | 2 | WD40 | 264 | 301 | 2.4e-22 | 77.9 | 1.4e-13 | 5.1e-10 | 38.8 |
| pfu_aug1.0_2013.1_22831.t1 | 3 | 3 | WD40 | 306 | 338 | 2.4e-22 | 77.9 | 1.7e-10 | 6.3e-07 | 29.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2013.1_22831.t1 | gi|242002940|ref|XP_002422550.1| | pre-mRNA-splicing factor, putative [Pediculus humanus corporis] | 1.0e-35 |
Transcript
| Transcript ID | pfu_aug1.0_2013.1_22831.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2013.1_22831.t1 atggatgacggacaaaccaagaaaaatgtggctttcagcgtgatgcttcccgcgaacaacagacgacgaaaaagaatcag gaagcgttctttcacagaagccttgagggaaaaatactgcatcaatgacccaaataaaatgtggaacgaagtttggaagt taaaacatttaccagagcttgaatctctcattctatctgggaatccactgaaacatattttctatgaaaatggtgatgaa tgtgaaaattgtgaaggtatggaagacaataagggtcaaaatattacaaatacaaacaagtcaacagaagaggcaattga tgaaattgttgatgttctcgtatcaaggacatttaagaaaatcgaagaaagctttcattccactaactcttcaaatgaaa catgtgaagatccttcaaaatctacagacatgtcaaagaagaaagaagataactgtgactcaaagaagagagaagatgta aaagccttttccaaattaagattgttgtgcgtgagtgagacaaagcttaacgactgggcacatatgatggagttagggaa atacccacagctcgagtctgtaagattgaaggcacttgaaaagaagacaagctcacccacagaagtgactgatattcttc aaaagattcaggacagtaaaaagagaaaggggcttcacgatgctcaagacccggggatattatctatggatgtcaatcca agaaattcatcaaaaattgtcacaggaggaaaagacaactgtgcagtagtattcagtaaagacctaggtcaggtcatggt catccttcaaggtcacaaagacgaggtcaaccatgttgtatatcatccagaagaggatgtagtggtcacatcatcagctg actgcacggtacgtgtttgggatgcacggaaagccaggtgcttacatacgatagatgctcacaatggaccaatcagaggg ctcgatttacatccatcaggagactatgtccttacttcctctatggacaagactttttcattttctgaccttagagaagg aaaagttctcctcaattttccagctaaagatgattcacaaggtatgtag |
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Protein
| Protein ID | pfu_aug1.0_2013.1_22831.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2013.1_22831.t1 MDDGQTKKNVAFSVMLPANNRRRKRIRKRSFTEALREKYCINDPNKMWNEVWKLKHLPELESLILSGNPLKHIFYENGDE CENCEGMEDNKGQNITNTNKSTEEAIDEIVDVLVSRTFKKIEESFHSTNSSNETCEDPSKSTDMSKKKEDNCDSKKREDV KAFSKLRLLCVSETKLNDWAHMMELGKYPQLESVRLKALEKKTSSPTEVTDILQKIQDSKKRKGLHDAQDPGILSMDVNP RNSSKIVTGGKDNCAVVFSKDLGQVMVILQGHKDEVNHVVYHPEEDVVVTSSADCTVRVWDARKARCLHTIDAHNGPIRG LDLHPSGDYVLTSSMDKTFSFSDLREGKVLLNFPAKDDSQGM |
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