Gene
| Gene Model ID | pfu_aug1.0_2013.1_22834 |
|---|---|
| Locus | scaffold2013.1 : 48106 ... 58715 : - |
| To GenomeBrowser | scaffold2013.1:48106..58715 |
| Genes list of scaffold | scaffold2013.1 |
| Synonym | pfu_aug2.0_37.1_23300 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2013.1_22834.t1 | 1 | 1 | Fe-ADH | 4 | 242 | 0.0 | 231.5 | 0.0 | 0.0 | 231.4 |
| pfu_aug1.0_2013.1_22834.t1 | 2 | 1 | Fe-ADH_2 | 5 | 63 | 2.0e-09 | 37.1 | 2.0e-11 | 1.5e-07 | 31.0 |
| pfu_aug1.0_2013.1_22834.t1 | 2 | 2 | Fe-ADH_2 | 121 | 235 | 2.0e-09 | 37.1 | 0.003 | 22.0 | 4.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2013.1_22834.t1 | gi|348539820|ref|XP_003457387.1| | PREDICTED: hydroxyacid-oxoacid transhydrogenase, mitochondrial-like [Oreochromis niloticus] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_2013.1_22834.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2013.1_22834.t1 atgaaaccagtacacactgtgttagagtccttagatgacaacaaggtcaaatacaagttgtttgatagatgcagggtaga accaactaacgagagttatgaagatgccatcaactttgccaagtctgaagattttgacgtgtttgttgctgtaggagggg gttcggtaatggacacgtgtaaagctgccaatctgtattcgaccaatccctccgcagaactactggattatgtgaatgct ccggtcggtaaaggattacctgtaacccatcaacttaaacctctgatagcaataaccacgactgctggcactggaagtga gactacaggaaccgctgtatttgattacctcccaatgaaagctaagacaggaatatccaatcgagctctgcggcccacct taggcattgttgatcctctacatttattagagatgccggagagagtgaccgcctacagtggaattgatgtactgtgccat gctattgaatcgtttacagctatcccatacaatgagagggtaccatacccagccaatccaaacttaaggcccgcctacca gggatgtaacccaatcagtgatatctggtcaaagcatgctcttacaatgacggcaaagtatctcaaacgtgcagtatatg acccatcagataaagaggcgcggtctgttatgggtttagcgtcatgctatgccggtataggatttggtaatgctggggta cacctttggtaa |
|
Protein
| Protein ID | pfu_aug1.0_2013.1_22834.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2013.1_22834.t1 MKPVHTVLESLDDNKVKYKLFDRCRVEPTNESYEDAINFAKSEDFDVFVAVGGGSVMDTCKAANLYSTNPSAELLDYVNA PVGKGLPVTHQLKPLIAITTTAGTGSETTGTAVFDYLPMKAKTGISNRALRPTLGIVDPLHLLEMPERVTAYSGIDVLCH AIESFTAIPYNERVPYPANPNLRPAYQGCNPISDIWSKHALTMTAKYLKRAVYDPSDKEARSVMGLASCYAGIGFGNAGV HLW |
|