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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_20151.1_40216
Locus scaffold20151.1 : 2996 ... 8269 : +
To GenomeBrowser scaffold20151.1:2996..8269
Genes list of scaffold scaffold20151.1
Synonym NA

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_20151.1_40216.t1 gi|291229663|ref|XP_002734792.1| PREDICTED: thioredoxin domain-containing protein 9-like [Saccoglossus kowalevskii] 4.00001e-41

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-4cell 1
egg-Dshape 1
trochophore 1
>Adult tissues
Dshape 1
adductorMuscle 1
maleGonad 1
mantle 1

Transcript
Transcript IDpfu_aug1.0_20151.1_40216.t1
Definition-
>pfu_aug1.0_20151.1_40216.t1
atggcacagaacattgtagagcagcagttgctgcaggcaaccaagataatggagcagcaagttgatgctgagatagaaag
gttggagaaaatggatgatgatgatttcgaaaagctacgacagaagcgaatggatgcaatgaagaaagctcagcagcaaa
agcaggagatgttgtctgcaggacacggaaaatactacgagatcgctactgaaaaagatttctttgatgagtgcaagaaa
agtaaaaaggttgtctgccatttctaccgagatagcacgttcaggtgcaagatcattgacaaacatttgaacattttagc
accaaagcatattgagactaagttcattaatataatgcagagaaatgtccgtttttggtggaaaggctacgtattgtag

Protein
Protein IDpfu_aug1.0_20151.1_40216.t1
Definition-
>pfu_aug1.0_20151.1_40216.t1
MAQNIVEQQLLQATKIMEQQVDAEIERLEKMDDDDFEKLRQKRMDAMKKAQQQKQEMLSAGHGKYYEIATEKDFFDECKK
SKKVVCHFYRDSTFRCKIIDKHLNILAPKHIETKFINIMQRNVRFWWKGYVL

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