Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_20151.1_40217
Locus scaffold20151.1 : 9896 ... 15884 : +
To GenomeBrowser scaffold20151.1:9896..15884
Genes list of scaffold scaffold20151.1
Synonym pfu_aug2.0_85.1_16882

Manual annotation
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
maleGonad 1
mantle 1
mantleEdge 1
pearlSac 1

Transcript
Transcript IDpfu_aug1.0_20151.1_40217.t1
Definition-
>pfu_aug1.0_20151.1_40217.t1
atgttttccatttcaattttcagcaagaagcagcgggtgcctttgttagaagaatacacgggagaggggattccccatgt
ggctgatgccgacacggagtctgggtcaggggaagtcgaccgtgaccaaatcttccatgttactgtgatggatgatatta
ttgatcaggaaagcgtctcgaaagacctcccgaaagagagacagatagaagaaaagggtaacataccacttgttctgatt
atacttccaatatcagcaggagttgtcgttatttcaacaatcgtcataaccatagtattgatgagaaagaggaacaagaa
gaaggaatctatgcgagcggaggaggcctgtatcatgactgtcaccaacacatactgtgaaatcgctcatggtttccaag
acgacaaatcgacaacttctcatggttacgacgtgctgaaaagggagtga

Protein
Protein IDpfu_aug1.0_20151.1_40217.t1
Definition-
>pfu_aug1.0_20151.1_40217.t1
MFSISIFSKKQRVPLLEEYTGEGIPHVADADTESGSGEVDRDQIFHVTVMDDIIDQESVSKDLPKERQIEEKGNIPLVLI
ILPISAGVVVISTIVITIVLMRKRNKKKESMRAEEACIMTVTNTYCEIAHGFQDDKSTTSHGYDVLKRE

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