Gene
| Gene Model ID | pfu_aug1.0_20175.1_69322 |
|---|---|
| Locus | scaffold20175.1 : 3450 ... 7605 : - |
| To GenomeBrowser | scaffold20175.1:3450..7605 |
| Genes list of scaffold | scaffold20175.1 |
| Synonym | pfu_aug2.0_715.1_17768 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | Pif 177 |
| Description | Pif 177 (Pif 80) partial sequence, hit to BLAST (NCBI, BAH97338.1) |
| mRNA evidence |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_20175.1_69322.t1 | gi|269969412|sp|C7G0B5.1|PIF_PINFU | Protein PIF [Pinctada fucata] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 2 |
Transcript
| Transcript ID | pfu_aug1.0_20175.1_69322.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20175.1_69322.t1 atgacgacgacaaaaaagctcagaatgaaaagagacgaacgaagcagaaaagattacctaaaagctatattaaaaagaga tgatagaaaagataagactgatgatacgaaaggaaggagaataattgatagaaacgatataatcgatgacaggagaggta gaaggaaagacgatagaaaggatggaggaagagacgatggaaaagatggcagaagagacgataggaaagataacagatta gatgacataaaggataaaaacgatgaaccaatgactctgatttcaaatggagaatgtgacaattttgaattgaatgactg tttcgaaaagccatcgatagccattacgactggaaagaagtctgctggattcagtgttacctcttctgaaaaagatgagg tagatctagaaattgatgaagacaagaaagggtatctctgggataaggaagatggacctgatagaaatggaaaagataaa gacagaaatggcgatagatcggacgacaggagaggctattactggaagaaaaaagataaagatgataacggaaaggataa agacaaaaagggggataaatccgacgataagaaaggttattattggaagaaagataaggatgataaaaatggaaaagata aagacaaaagaagggacaaatcagacgacaaaaagagcctcgacgacattgtgagggaaatagaaagaagcaagggcaat ggtaaagatgacaacaaagacgacgaagatgacgacaagaaaggatggaagacggtctcactgaaaataagtaacggaca tattaggggaagaagggatgatagagaagataaagacgttttggatggtgatttgaagacgacgttctccggcttccaaa taggtcaaggagctagcaacaagaactttaaaggttacatggatgagaacaaatactggaccgagtttaccgttgttttc tttgaaatctactattcacccttccacagttcccgctatttcattgtttttgctccaaaaaaaaagcgcttactctaa |
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Protein
| Protein ID | pfu_aug1.0_20175.1_69322.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20175.1_69322.t1 MTTTKKLRMKRDERSRKDYLKAILKRDDRKDKTDDTKGRRIIDRNDIIDDRRGRRKDDRKDGGRDDGKDGRRDDRKDNRL DDIKDKNDEPMTLISNGECDNFELNDCFEKPSIAITTGKKSAGFSVTSSEKDEVDLEIDEDKKGYLWDKEDGPDRNGKDK DRNGDRSDDRRGYYWKKKDKDDNGKDKDKKGDKSDDKKGYYWKKDKDDKNGKDKDKRRDKSDDKKSLDDIVREIERSKGN GKDDNKDDEDDDKKGWKTVSLKISNGHIRGRRDDREDKDVLDGDLKTTFSGFQIGQGASNKNFKGYMDENKYWTEFTVVF FEIYYSPFHSSRYFIVFAPKKKRLL |
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