Gene
| Gene Model ID | pfu_aug1.0_2018.1_66177 |
|---|---|
| Locus | scaffold2018.1 : 14146 ... 23686 : + |
| To GenomeBrowser | scaffold2018.1:14146..23686 |
| Genes list of scaffold | scaffold2018.1 |
| Synonym | pfu_aug2.0_608.1_27584 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2018.1_66177.t1 | 1 | 1 | Asparaginase_2 | 31 | 217 | 2.8026e-45 | 154.4 | 0.0 | 2.8026e-45 | 154.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2018.1_66177.t1 | gi|260793495|ref|XP_002591747.1| | hypothetical protein BRAFLDRAFT_59281 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2018.1_66177.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2018.1_66177.t1 atgaaaggtagacagaattaccatcgaaattgtgttataatcattgaacgccttttatattgtggatatgatccttctgt caccatgcggacacttggattgacagatcacactttgttggtgggacttggatcaaatcaatttgctgaggaaattggaa tggaaaaggtgtcaacagacgacctggtgaccgaggatgctaaagctgagtggagagaattcatgaaatttaaaacgact gtcaacgtcttattcaggaacagagacgtcaaattgagtggttgtgacacagtgggagctgttgccctagataatgctgg aaatgtcgcgtttggtacctctactggcgggataacagccaagaggccagggagagtaggggacagtccaatcatagggt caggaggttatgctgacaacacatctggagccgtgtctactacaggacatggtgaatctattgtcaaagtctgtctagct cgacaaatcaccttcaacatggaacaaggtctctctgcccaggaggccacggaaaaagcactacagagtatggctaacag agtacagggatcaggtggtgcagtgacagtaagtaaggatggagacataggcaagcacttcaccacagagaggatggcat ggtcgtggattaaagatggacaactacattacgggctcaaccctggggaagacttcagtcaggcagtgtaa |
|
Protein
| Protein ID | pfu_aug1.0_2018.1_66177.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2018.1_66177.t1 MKGRQNYHRNCVIIIERLLYCGYDPSVTMRTLGLTDHTLLVGLGSNQFAEEIGMEKVSTDDLVTEDAKAEWREFMKFKTT VNVLFRNRDVKLSGCDTVGAVALDNAGNVAFGTSTGGITAKRPGRVGDSPIIGSGGYADNTSGAVSTTGHGESIVKVCLA RQITFNMEQGLSAQEATEKALQSMANRVQGSGGAVTVSKDGDIGKHFTTERMAWSWIKDGQLHYGLNPGEDFSQAV |
|