Gene
| Gene Model ID | pfu_aug1.0_2018.1_66185 |
|---|---|
| Locus | scaffold2018.1 : 101196 ... 106063 : + |
| To GenomeBrowser | scaffold2018.1:101196..106063 |
| Genes list of scaffold | scaffold2018.1 |
| Synonym | pfu_aug2.0_589.1_30944 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2018.1_66185.t1 | 2 | 1 | MFS_1 | 2 | 264 | 4.0e-22 | 78.4 | 1.2e-18 | 1.7e-14 | 53.3 |
| pfu_aug1.0_2018.1_66185.t1 | 2 | 2 | MFS_1 | 214 | 336 | 4.0e-22 | 78.4 | 6.5e-13 | 9.7e-09 | 34.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2018.1_66185.t1 | gi|260796291|ref|XP_002593138.1| | hypothetical protein BRAFLDRAFT_72777 [Branchiostoma floridae] | 1.0e-32 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2018.1_66185.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2018.1_66185.t1 atggtgggaggattgctccttgcggtaggttacagtgccagcttcttcgtgtacagacttgattttcttcttgtcacata cggtattttagcaggaactggtaccagctttatctgtatgacaacagttgttgtgatagcttattcctttgtcaagtacc gaggtgtcgttgttggtatcaacatcgcaggagcgggcctgggaatgttcgcaagtggccccgcagctcaagctcttata gatgcttacaatgtgcatggcgcctttctgatgttaggggcaatttcatcacatgccatcgtgtttggagcattgttgag gccgtctcatatagaattgggtcaaaaggtaaaactacattttaggaaaaggacagaaaaggacgattctagtcaatcct gctcagattccggtgtggtgcagttgttcaaaaatcttacattcctctgttttgtggtatccagtttactatggaacttc tcctatgcaatgcttctgatccacctcccgaatttcgcccatgtaagtggcgccgaccaccaccagtctgccctgcttat aacaatgatcggtgttggtagcaccttcaacaggattcttacgggtttgacacagggtcctgatgggttcgatcctttgt tgatatacatgggctttctgggcgttactggggctcttatactcacctttcctctttattcagcacagtacagcggacag atggtattttcacttctatttggagtatacagtggaggtctgattgccttattcaacccactctccattgagctagtcgg actccaacaattgtcgtctggtgttggtatcctcttcttcttgtcagggataggatacatcatcggaccacctgttgcag gctttattgttgacaatggagggagttacaacgaagggttctttctatcaggtctatttttcgtggtttctttccttatg atgctagtatccgctgcctacaggaagccaatatcggaagtagaagactccgaagtattgtcggtcaaacgactggcaga gacgcgttttctttccggatctacctgcataagtacctcattgtcgcttattgttcaagacgaaatcagcagcctgaagg caaaatcccgggctgtatcggccagtaatatagaactacatgaaagtacagccgttcttgctaatggctaccattcctca tccttgcttggctccaagaccttgtattcaacggaccaaaacgatcaagatccataa |
|
Protein
| Protein ID | pfu_aug1.0_2018.1_66185.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2018.1_66185.t1 MVGGLLLAVGYSASFFVYRLDFLLVTYGILAGTGTSFICMTTVVVIAYSFVKYRGVVVGINIAGAGLGMFASGPAAQALI DAYNVHGAFLMLGAISSHAIVFGALLRPSHIELGQKVKLHFRKRTEKDDSSQSCSDSGVVQLFKNLTFLCFVVSSLLWNF SYAMLLIHLPNFAHVSGADHHQSALLITMIGVGSTFNRILTGLTQGPDGFDPLLIYMGFLGVTGALILTFPLYSAQYSGQ MVFSLLFGVYSGGLIALFNPLSIELVGLQQLSSGVGILFFLSGIGYIIGPPVAGFIVDNGGSYNEGFFLSGLFFVVSFLM MLVSAAYRKPISEVEDSEVLSVKRLAETRFLSGSTCISTSLSLIVQDEISSLKAKSRAVSASNIELHESTAVLANGYHSS SLLGSKTLYSTDQNDQDP |
|