Gene
| Gene Model ID | pfu_aug1.0_2021.1_22841 |
|---|---|
| Locus | scaffold2021.1 : 23543 ... 38085 : - |
| To GenomeBrowser | scaffold2021.1:23543..38085 |
| Genes list of scaffold | scaffold2021.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2021.1_22841.t1 | 2 | 1 | LRR_8 | 2 | 56 | 4.4e-07 | 29.5 | 1.6e-07 | 0.00039 | 20.1 |
| pfu_aug1.0_2021.1_22841.t1 | 2 | 2 | LRR_8 | 21 | 74 | 4.4e-07 | 29.5 | 5.2e-06 | 0.013 | 15.2 |
| pfu_aug1.0_2021.1_22841.t1 | 1 | 1 | TIR | 190 | 310 | 1.4e-07 | 31.0 | 1.1e-10 | 2.7e-07 | 30.1 |
Transcript
| Transcript ID | pfu_aug1.0_2021.1_22841.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2021.1_22841.t1 atgacattgcttatggatggtaacaacatacggtccatccctgatgctgattatcttgaaagaatccattcgctcgatat atctagctgcagtgtaacaaacatagctagcaaggccgtcgacagacttccgaaaggagttatactaaacattacgggta accctctacgtaagattccaaatgatctgatattaaagagtgtttccctcggcgcattgaagatgtactgcagttgtgat gtagtcggtatactaacatggaacacgtaccaaaatatcgacaaaaccactgttgtttattgtcaaaattatggcgggaa atctttgcaagaggttagcgctcaaattcgtgagctatgtgatgaagataaagataattttggcattatctttgcaataa ttgttgcatttgtaggtttactttttatctgtgttagtgcaacattgtgtatattgtatggaccggaagctctcattttg taccgtacatatatacgtatgaattcacgatattgtaaaacaaaatttgaaaatgacatttacatatgtatggatgacag caatgcttatttacgaaaatgggtgcttaggacactagtaccagcctttgacagccttagaatgaggattttccttcctt gtagagattcagctgtaggtcaaggaatagaggaaaatctttccggagaaattgacaacagcagaacatttatcatcatt cttagcaatagctttgaacgtggaaaggaagacaatctaaaatcaacagttcttgcaatggaaatcaaccgcatttggtt taatttcaagaaaagaccaatcaaaaatataattgcgattaactttgataatctgaaatcaagcaacgttcataatagat atgtcaaagctattttacggtgtcatatcgatattaatgtaacggaccgttatcaaaaagtcgtgcaaagaccatttgta gaaaagattgaagaaaacaatatccaaacatcatccagtttgggcagaaattga |
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Protein
| Protein ID | pfu_aug1.0_2021.1_22841.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2021.1_22841.t1 MTLLMDGNNIRSIPDADYLERIHSLDISSCSVTNIASKAVDRLPKGVILNITGNPLRKIPNDLILKSVSLGALKMYCSCD VVGILTWNTYQNIDKTTVVYCQNYGGKSLQEVSAQIRELCDEDKDNFGIIFAIIVAFVGLLFICVSATLCILYGPEALIL YRTYIRMNSRYCKTKFENDIYICMDDSNAYLRKWVLRTLVPAFDSLRMRIFLPCRDSAVGQGIEENLSGEIDNSRTFIII LSNSFERGKEDNLKSTVLAMEINRIWFNFKKRPIKNIIAINFDNLKSSNVHNRYVKAILRCHIDINVTDRYQKVVQRPFV EKIEENNIQTSSSLGRN |
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