Gene
| Gene Model ID | pfu_aug1.0_2034.1_15684 |
|---|---|
| Locus | scaffold2034.1 : 3670 ... 8381 : + |
| To GenomeBrowser | scaffold2034.1:3670..8381 |
| Genes list of scaffold | scaffold2034.1 |
| Synonym | pfu_aug2.0_547.1_24165 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2034.1_15684.t1 | 1 | 1 | LRAT | 14 | 103 | 1.1e-15 | 57.6 | 4.5e-19 | 1.3e-15 | 57.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2034.1_15684.t1 | gi|260811516|ref|XP_002600468.1| | hypothetical protein BRAFLDRAFT_119296 [Branchiostoma floridae] | 3.0e-15 |
Transcript
| Transcript ID | pfu_aug1.0_2034.1_15684.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2034.1_15684.t1 atggatccatatacagcggcgttacatcataaccaaaccaccttacagaaactacgagtaggagacatggtggaattcaa aagaggattatattcacattggggagtatatattggtaatgaagaaatagttcacttaactggagatgaaaacgatggaa ttaatggaaatgtgaactctggtcatttgttcaccatatgtggcaagaactttaataaggcttatgtaaaaaaagacaaa ttctgggatgttgtattggattctaaagcttacaagaacaacgataaagataagaaattgagtcaactcaaagaatcatt atgcaattttacagagcattttgataacatgaaatga |
|
Protein
| Protein ID | pfu_aug1.0_2034.1_15684.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2034.1_15684.t1 MDPYTAALHHNQTTLQKLRVGDMVEFKRGLYSHWGVYIGNEEIVHLTGDENDGINGNVNSGHLFTICGKNFNKAYVKKDK FWDVVLDSKAYKNNDKDKKLSQLKESLCNFTEHFDNMK |
|