Gene
| Gene Model ID | pfu_aug1.0_20342.1_61992 |
|---|---|
| Locus | scaffold20342.1 : 1 ... 16241 : + |
| To GenomeBrowser | scaffold20342.1:1..16241 |
| Genes list of scaffold | scaffold20342.1 |
| Synonym | pfu_aug2.0_21.1_03430 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_20342.1_61992.t1 | 13 | 1 | Ank_4 | 18 | 66 | 0.0 | 167.2 | 7.6e-07 | 0.0014 | 19.0 |
| pfu_aug1.0_20342.1_61992.t1 | 7 | 1 | Ank_2 | 19 | 109 | 0.0 | 252.3 | 2.1e-19 | 3.9e-16 | 59.1 |
| pfu_aug1.0_20342.1_61992.t1 | 11 | 1 | Ank_5 | 44 | 78 | 0.0 | 195.3 | 2.0e-06 | 0.0037 | 17.4 |
| pfu_aug1.0_20342.1_61992.t1 | 12 | 1 | Ank | 46 | 76 | 0.0 | 227.9 | 2.9e-09 | 5.4e-06 | 25.9 |
| pfu_aug1.0_20342.1_61992.t1 | 13 | 1 | Ank_3 | 46 | 73 | 0.0 | 165.8 | 1.1e-05 | 0.021 | 15.0 |
| pfu_aug1.0_20342.1_61992.t1 | 13 | 2 | Ank_4 | 48 | 99 | 0.0 | 167.2 | 1.7e-12 | 3.1e-09 | 37.0 |
| pfu_aug1.0_20342.1_61992.t1 | 11 | 2 | Ank_5 | 70 | 117 | 0.0 | 195.3 | 7.8e-11 | 1.5e-07 | 31.4 |
| pfu_aug1.0_20342.1_61992.t1 | 12 | 2 | Ank | 80 | 110 | 0.0 | 227.9 | 3.1e-09 | 5.8e-06 | 25.8 |
| pfu_aug1.0_20342.1_61992.t1 | 13 | 2 | Ank_3 | 80 | 106 | 0.0 | 165.8 | 1.1e-07 | 0.00021 | 21.2 |
| pfu_aug1.0_20342.1_61992.t1 | 7 | 2 | Ank_2 | 84 | 167 | 0.0 | 252.3 | 7.8e-18 | 1.4e-14 | 54.1 |
| pfu_aug1.0_20342.1_61992.t1 | 11 | 3 | Ank_5 | 102 | 152 | 0.0 | 195.3 | 1.1e-08 | 2.0e-05 | 24.6 |
| pfu_aug1.0_20342.1_61992.t1 | 13 | 3 | Ank_4 | 102 | 132 | 0.0 | 167.2 | 0.00099 | 1.8 | 9.1 |
| pfu_aug1.0_20342.1_61992.t1 | 12 | 3 | Ank | 113 | 135 | 0.0 | 227.9 | 0.019 | 35.0 | 4.4 |
| pfu_aug1.0_20342.1_61992.t1 | 13 | 3 | Ank_3 | 113 | 136 | 0.0 | 165.8 | 0.099 | 180.0 | 2.8 |
| pfu_aug1.0_20342.1_61992.t1 | 13 | 4 | Ank_4 | 113 | 164 | 0.0 | 167.2 | 8.8e-09 | 1.6e-05 | 25.2 |
| pfu_aug1.0_20342.1_61992.t1 | 11 | 4 | Ank_5 | 139 | 165 | 0.0 | 195.3 | 1.1e-05 | 0.02 | 15.1 |
| pfu_aug1.0_20342.1_61992.t1 | 12 | 4 | Ank | 145 | 166 | 0.0 | 227.9 | 6.6e-07 | 0.0012 | 18.5 |
| pfu_aug1.0_20342.1_61992.t1 | 13 | 4 | Ank_3 | 145 | 167 | 0.0 | 165.8 | 3.3e-06 | 0.006 | 16.7 |
| pfu_aug1.0_20342.1_61992.t1 | 13 | 5 | Ank_4 | 145 | 198 | 0.0 | 167.2 | 2.8e-08 | 5.3e-05 | 23.6 |
| pfu_aug1.0_20342.1_61992.t1 | 11 | 5 | Ank_5 | 165 | 215 | 0.0 | 195.3 | 4.8e-12 | 8.9e-09 | 35.3 |
| pfu_aug1.0_20342.1_61992.t1 | 7 | 3 | Ank_2 | 174 | 239 | 0.0 | 252.3 | 2.1e-16 | 3.9e-13 | 49.5 |
| pfu_aug1.0_20342.1_61992.t1 | 13 | 5 | Ank_3 | 178 | 203 | 0.0 | 165.8 | 8.3e-07 | 0.0015 | 18.5 |
| pfu_aug1.0_20342.1_61992.t1 | 13 | 6 | Ank_4 | 178 | 223 | 0.0 | 167.2 | 0.00011 | 0.21 | 12.1 |
| pfu_aug1.0_20342.1_61992.t1 | 12 | 5 | Ank | 179 | 208 | 0.0 | 227.9 | 7.3e-10 | 1.4e-06 | 27.8 |
| pfu_aug1.0_20342.1_61992.t1 | 11 | 6 | Ank_5 | 208 | 248 | 0.0 | 195.3 | 8.6e-07 | 0.0016 | 18.6 |
| pfu_aug1.0_20342.1_61992.t1 | 12 | 6 | Ank | 211 | 241 | 0.0 | 227.9 | 7.2e-07 | 0.0013 | 18.3 |
| pfu_aug1.0_20342.1_61992.t1 | 13 | 6 | Ank_3 | 211 | 238 | 0.0 | 165.8 | 2.3e-05 | 0.042 | 14.0 |
| pfu_aug1.0_20342.1_61992.t1 | 13 | 7 | Ank_4 | 212 | 251 | 0.0 | 167.2 | 1.5e-05 | 0.028 | 14.9 |
| pfu_aug1.0_20342.1_61992.t1 | 12 | 7 | Ank | 244 | 280 | 0.0 | 227.9 | 7.1e-07 | 0.0013 | 18.4 |
| pfu_aug1.0_20342.1_61992.t1 | 13 | 7 | Ank_3 | 261 | 277 | 0.0 | 165.8 | 0.002 | 3.7 | 8.0 |
| pfu_aug1.0_20342.1_61992.t1 | 7 | 4 | Ank_2 | 262 | 311 | 0.0 | 252.3 | 5.5e-13 | 1.0e-09 | 38.5 |
| pfu_aug1.0_20342.1_61992.t1 | 13 | 8 | Ank_4 | 262 | 302 | 0.0 | 167.2 | 1.1e-09 | 2.0e-06 | 28.1 |
| pfu_aug1.0_20342.1_61992.t1 | 11 | 7 | Ank_5 | 268 | 322 | 0.0 | 195.3 | 4.3e-11 | 7.9e-08 | 32.3 |
| pfu_aug1.0_20342.1_61992.t1 | 12 | 8 | Ank | 282 | 313 | 0.0 | 227.9 | 3.0e-08 | 5.5e-05 | 22.7 |
| pfu_aug1.0_20342.1_61992.t1 | 13 | 8 | Ank_3 | 282 | 308 | 0.0 | 165.8 | 0.0004 | 0.74 | 10.2 |
| pfu_aug1.0_20342.1_61992.t1 | 7 | 5 | Ank_2 | 291 | 369 | 0.0 | 252.3 | 1.8e-17 | 3.2e-14 | 53.0 |
| pfu_aug1.0_20342.1_61992.t1 | 13 | 9 | Ank_4 | 293 | 335 | 0.0 | 167.2 | 7.7e-06 | 0.014 | 15.8 |
| pfu_aug1.0_20342.1_61992.t1 | 11 | 8 | Ank_5 | 314 | 347 | 0.0 | 195.3 | 1.0e-06 | 0.0019 | 18.3 |
| pfu_aug1.0_20342.1_61992.t1 | 12 | 9 | Ank | 315 | 345 | 0.0 | 227.9 | 3.2e-07 | 0.00059 | 19.5 |
| pfu_aug1.0_20342.1_61992.t1 | 13 | 9 | Ank_3 | 315 | 342 | 0.0 | 165.8 | 4.2e-06 | 0.0078 | 16.3 |
| pfu_aug1.0_20342.1_61992.t1 | 13 | 10 | Ank_4 | 316 | 360 | 0.0 | 167.2 | 1.2e-09 | 2.3e-06 | 27.9 |
| pfu_aug1.0_20342.1_61992.t1 | 11 | 9 | Ank_5 | 334 | 373 | 0.0 | 195.3 | 1.0e-07 | 0.00019 | 21.5 |
| pfu_aug1.0_20342.1_61992.t1 | 12 | 10 | Ank | 349 | 369 | 0.0 | 227.9 | 0.00033 | 0.6 | 10.0 |
| pfu_aug1.0_20342.1_61992.t1 | 13 | 10 | Ank_3 | 349 | 370 | 0.0 | 165.8 | 8.8e-05 | 0.16 | 12.2 |
| pfu_aug1.0_20342.1_61992.t1 | 7 | 6 | Ank_2 | 363 | 442 | 0.0 | 252.3 | 3.9e-15 | 7.2e-12 | 45.4 |
| pfu_aug1.0_20342.1_61992.t1 | 11 | 10 | Ank_5 | 383 | 421 | 0.0 | 195.3 | 2.1e-10 | 4.0e-07 | 30.0 |
| pfu_aug1.0_20342.1_61992.t1 | 13 | 11 | Ank_4 | 383 | 401 | 0.0 | 167.2 | 0.023 | 42.0 | 4.8 |
| pfu_aug1.0_20342.1_61992.t1 | 12 | 11 | Ank | 384 | 411 | 0.0 | 227.9 | 2.6e-07 | 0.00048 | 19.8 |
| pfu_aug1.0_20342.1_61992.t1 | 13 | 11 | Ank_3 | 384 | 409 | 0.0 | 165.8 | 0.00022 | 0.41 | 11.0 |
| pfu_aug1.0_20342.1_61992.t1 | 13 | 12 | Ank_4 | 385 | 434 | 0.0 | 167.2 | 2.6e-06 | 0.0048 | 17.3 |
| pfu_aug1.0_20342.1_61992.t1 | 12 | 12 | Ank | 413 | 443 | 0.0 | 227.9 | 2.1e-08 | 3.9e-05 | 23.2 |
| pfu_aug1.0_20342.1_61992.t1 | 13 | 12 | Ank_3 | 413 | 440 | 0.0 | 165.8 | 1.5e-05 | 0.027 | 14.6 |
| pfu_aug1.0_20342.1_61992.t1 | 11 | 11 | Ank_5 | 414 | 443 | 0.0 | 195.3 | 6.0e-05 | 0.11 | 12.7 |
| pfu_aug1.0_20342.1_61992.t1 | 13 | 13 | Ank_4 | 466 | 484 | 0.0 | 167.2 | 0.18 | 340.0 | 1.9 |
| pfu_aug1.0_20342.1_61992.t1 | 7 | 7 | Ank_2 | 467 | 484 | 0.0 | 252.3 | 0.57 | 1100.0 | 0.0 |
| pfu_aug1.0_20342.1_61992.t1 | 13 | 13 | Ank_3 | 467 | 483 | 0.0 | 165.8 | 0.91 | 1700.0 | -0.2 |
| pfu_aug1.0_20342.1_61992.t1 | 1 | 1 | SOCS_box | 531 | 568 | 9.7e-06 | 25.3 | 2.1e-08 | 3.9e-05 | 23.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_20342.1_61992.t1 | gi|115877255|ref|XP_001190300.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_20342.1_61992.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20342.1_61992.t1 atagatcaagaaatggatttgagaaaagagaaaaaagaagaagaattcgaaaattacaggatgcaatttcagacaatgac atggataaagtcagagagtgtttgcaggagagttttgatgttgacttccagtacaggggtcagacggctttacagcatgc tgtcaaggaagggaagtttgagatttgtaaattgttgattggcaggggcgcagaagtggacgttacagatgctgaaaaga acagtctattaaacatggcctgctggaggggacattatgatattgctgaactactcataaggaataatgctaacattaac tcacagaatgatggtaacctaacgccactgaatgcttgtgccattaaaggggagtgtagaatagcacagctactcttaca ggctaactgtaccgcagcattacccgattctagtggaaatacacccctccacactgctgtcaaacacaatcaggaggcca tggttcagattctggctaaaaataatgatttactggactgtataaacgaggaaaacagaacaccacttatgttggcttca agtcttggtcacagtgttattgtggatattttattagaaaatggtgctgatactaaaaagcaggacagacgtggaaggag tgctgtattagacgcagcagagaacggacacgataggattataaagtcactactacaatataacgctgatgtcaatctgt caacgaaaaaaggtcatacacctctcctagtatctcagacatttggtaatgactctgacttggccatggatgtggttaag aaccttgtttcgcatggctgtaatattaacatacaggataatcaaggatggactccactgtaccagagtgcttttgctgg caatgcagaattaactggtctactgttagataaaggtgctgatctcagtgtgaagactaaagaaggggacacagtgttac atggtgctgtatacggatataatgtcactgtggtagaattactaattaaagcagggtgtgacattaacagagtaaatgga aagaagcagacccccctatacacggcctgtgagaagggtaatgatgcactggtagagaacctgcttgccaccccagggtg caaagtgggtggggctgctcaaaccacaattcctctacatgcagctgtcatgaacaacttctcctatattgtacagaaac ttatcaatgctggtgctaacattaatgagctcaattttgatggtctcactccaatcatggttgcatcacaagagaacagt gtgcgagcagctaaggtgttactaaggaatggatgtgacctacaggcccatgccaaggtaaaaaaactcatgaagtgctg tctgtttcacgaagatgcccatcctcattttgatctggagccaatgtttctagccatggctcataaaaatctggaacttt tacagttgtatgtgtactgttccaagcatccctcatacaaaacgattaaaactctctccgaaattctccgaacagcaaga gagcttcatacacacttgtccaaagatcagagacaaaatattctcaagtttttcaaagacacgatagaaattcctagatc tctacaagaaatatgtcgaggaaatattcgggacttgattggctgcaatatttatcaaaaaatggaggagcttcctgttg caaacaaacttaaggagtatctgttgatgaaggaaattctgggtgaaatggatgcagaggaagaggaagaagaaagacat gttgggagatttacttttgttggacgtcttcatttaccaggtgaagactaa |
|
Protein
| Protein ID | pfu_aug1.0_20342.1_61992.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20342.1_61992.t1 RSRNGFEKREKRRRIRKLQDAISDNDMDKVRECLQESFDVDFQYRGQTALQHAVKEGKFEICKLLIGRGAEVDVTDAEKN SLLNMACWRGHYDIAELLIRNNANINSQNDGNLTPLNACAIKGECRIAQLLLQANCTAALPDSSGNTPLHTAVKHNQEAM VQILAKNNDLLDCINEENRTPLMLASSLGHSVIVDILLENGADTKKQDRRGRSAVLDAAENGHDRIIKSLLQYNADVNLS TKKGHTPLLVSQTFGNDSDLAMDVVKNLVSHGCNINIQDNQGWTPLYQSAFAGNAELTGLLLDKGADLSVKTKEGDTVLH GAVYGYNVTVVELLIKAGCDINRVNGKKQTPLYTACEKGNDALVENLLATPGCKVGGAAQTTIPLHAAVMNNFSYIVQKL INAGANINELNFDGLTPIMVASQENSVRAAKVLLRNGCDLQAHAKVKKLMKCCLFHEDAHPHFDLEPMFLAMAHKNLELL QLYVYCSKHPSYKTIKTLSEILRTARELHTHLSKDQRQNILKFFKDTIEIPRSLQEICRGNIRDLIGCNIYQKMEELPVA NKLKEYLLMKEILGEMDAEEEEEERHVGRFTFVGRLHLPGED |
|