Gene
| Gene Model ID | pfu_aug1.0_20355.1_25865 |
|---|---|
| Locus | scaffold20355.1 : 11443 ... 16125 : - |
| To GenomeBrowser | scaffold20355.1:11443..16125 |
| Genes list of scaffold | scaffold20355.1 |
| Synonym | pfu_aug2.0_51.1_03502 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_20355.1_25865.t1 | 2 | 1 | Alpha-amylase | 56 | 365 | 0.0 | 190.3 | 0.0 | 0.0 | 190.3 |
| pfu_aug1.0_20355.1_25865.t1 | 2 | 2 | Alpha-amylase | 410 | 461 | 0.0 | 190.3 | 0.25 | 1200.0 | -1.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_20355.1_25865.t1 | gi|220679491|emb|CAX14245.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| 8-16cell | 2 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 2 |
| maleGonad | 2 |
| mantle | 2 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_20355.1_25865.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20355.1_25865.t1 atgctagtggccgccattgtcatcatcgtcctcgcaccacgctgtccatatcgacccgatcagaaatggtacgacaaaga aacagtctaccaagtctacccacgatccttcaaagattctaccaagaaatccgctaacaacgccaacccagtaggtgtag gacttggggatctcgcagggcttcaatctaaaatggagtacataaaagatcttggaatgaaagtaatttacatcaattcc atctatgaaactgctgatgctgatgtgggcttggactggacagatcacaaaaaggtgcatcctgctttggggacaatgga agagtttgataaactccgcaaagacaccaagaaaaccgaggttcgtctgatccttgactacattccaaaccacacgagta agaaccacacttggttccataagagtatcatgaaggaggatccatacactgactattatgtatggagggactgcacagct gatgtatatccaaataactggtcagcgtggacttacgatacaaccagaaaacagtgttacctacatcagctccatgatag cgaaccagatctaaacctggaaaataccaaagtcaaacaggaactagagggtattttgcgtttttggttggacaaaggtg tagacggcttccacataataggagcggaatatctgtacgagaatgtctccgctggtgaacagaagaatcaaaagagaaat gttgagattataaaagaatggaaaaaagtcctggaaacctacaacaccaaacctggaaaggaaaaggctttaattgtaac agtaaagaaccctagtgatgctaagatgtactacagtggtggtaatggagccacattagtgagaattcagcctctaagca acaacatgaccaactcactggccggaaaaatcctggagcaatccgcaatgatgactggtatcaaaacaggatggatgtat ggagatcaagacatgagtcgtttggcttcctcagttcctgctgagaacgtcaatgccatgctgaccttacagatgttgtt accaggtgtaccattcaactactatggagatgaaatctcaatgaccaataacgatgctgcagaaactaatccagctgatc aggctaaaccaagcagaagtccattcagaacaccaatgcagtggacagatgactttaataacaatggaggatttagtatg ctcaaaccttggctgccacttaaccagacagatatcaaagaacataatgtggagacccagaatgcctatctgaatgacta cacttcactgaaagtcgtcaaaaagctggtcaaacttcgtgctaaggaatcattccaatggggagatcttaagatgtaca tggaagacgacctactgatgtttacacgtaaagcagagggtttcagcggatacttggtagtgctgaacctcggtaacacg ggaaagacggagaaattctatgatacaacgggcgtatccaagtctgtcaaactcgtcttccattcaatggaagatagtga gaaggagattgacctatccaagaactccttgtacttaaaaccaaatgatgctgtggtactgcagtatgaataa |
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Protein
| Protein ID | pfu_aug1.0_20355.1_25865.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20355.1_25865.t1 MLVAAIVIIVLAPRCPYRPDQKWYDKETVYQVYPRSFKDSTKKSANNANPVGVGLGDLAGLQSKMEYIKDLGMKVIYINS IYETADADVGLDWTDHKKVHPALGTMEEFDKLRKDTKKTEVRLILDYIPNHTSKNHTWFHKSIMKEDPYTDYYVWRDCTA DVYPNNWSAWTYDTTRKQCYLHQLHDSEPDLNLENTKVKQELEGILRFWLDKGVDGFHIIGAEYLYENVSAGEQKNQKRN VEIIKEWKKVLETYNTKPGKEKALIVTVKNPSDAKMYYSGGNGATLVRIQPLSNNMTNSLAGKILEQSAMMTGIKTGWMY GDQDMSRLASSVPAENVNAMLTLQMLLPGVPFNYYGDEISMTNNDAAETNPADQAKPSRSPFRTPMQWTDDFNNNGGFSM LKPWLPLNQTDIKEHNVETQNAYLNDYTSLKVVKKLVKLRAKESFQWGDLKMYMEDDLLMFTRKAEGFSGYLVVLNLGNT GKTEKFYDTTGVSKSVKLVFHSMEDSEKEIDLSKNSLYLKPNDAVVLQYE |
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