Gene
| Gene Model ID | pfu_aug1.0_20371.1_11310 |
|---|---|
| Locus | scaffold20371.1 : 3498 ... 28981 : - |
| To GenomeBrowser | scaffold20371.1:3498..28981 |
| Genes list of scaffold | scaffold20371.1 |
| Synonym | pfu_aug2.0_529.1_30861 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_20371.1_11310.t1 | 1 | 1 | Isochorismatase | 1 | 62 | 1.3e-16 | 61.0 | 2.1e-20 | 1.6e-16 | 60.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_20371.1_11310.t1 | gi|291238288|ref|XP_002739066.1| | PREDICTED: isochorismatase domain-containing protein 2, mitochondrial-like [Saccoglossus kowalevskii] | 3.0e-35 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_20371.1_11310.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20371.1_11310.t1 atatcaattcagtagtactgtgtggtatagagaaccatgtgtgtgtacagaatacagtgttagaccttctagaagaacat ttcgatgtacatgtcgtagcagatgcttgctcctcaaggtcaatggtggacagattatttgcttttcaacgtatgcgaga ggcgggtgcctttgtaacaaccagtgagtgtatgttgcttggtctttgtggagatgcagctcacccaaagttccgctcga tacagaaattaatatgggactctgcacctgacagcggtctcctaactacaaagataaatgacggcacacctgtatga |
|
Protein
| Protein ID | pfu_aug1.0_20371.1_11310.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20371.1_11310.t1 INSVVLCGIENHVCVQNTVLDLLEEHFDVHVVADACSSRSMVDRLFAFQRMREAGAFVTTSECMLLGLCGDAAHPKFRSI QKLIWDSAPDSGLLTTKINDGTPV |
|