Gene
| Gene Model ID | pfu_aug1.0_20407.1_25867 |
|---|---|
| Locus | scaffold20407.1 : 1 ... 6769 : + |
| To GenomeBrowser | scaffold20407.1:1..6769 |
| Genes list of scaffold | scaffold20407.1 |
| Synonym | pfu_aug2.0_15825.1_19873 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_20407.1_25867.t1 | 1 | 1 | Tubulin | 1 | 70 | 2.0e-18 | 67.0 | 4.2e-22 | 3.2e-18 | 66.3 |
| pfu_aug1.0_20407.1_25867.t1 | 1 | 1 | Tubulin_C | 151 | 269 | 1.5e-29 | 102.6 | 3.0e-33 | 2.2e-29 | 102.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_20407.1_25867.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20407.1_25867.t1 ggacaggttctggagtaggaacatacaccctcaacctcctggctgatgaatacccggatgtttacagatttgtgacagcc gtttacccctcggcagatgatgatgtcataacctcgccatataacagtgttctggccatgagagaactaacggacaaagc tgattgtgtgcttccaattgaaaatcagtcccttgtagatatagtgaacaagataggccaggctgtaccatcagctaaga tgggtaagagagtgttcgctgccagcggggtgaagtcagggagtgccctaacagcaggggaaggagggctcagtaaaccc tctgatgaacgtccatttgatagcatgaataatatagtagccaacttgctacttaatctaacaagctctgccagatttga aggatccctgaacgtggacttgaacgagataacaatgaacttggtaccgtttccccgacttcactaccttgtagccagtc agactccactgtatgcactagctgatgttaacttacctcctagaagattggatcagatgttttctgatgcattctccaga gatcatcagctgatcaaggcagaccccaaacacagtctgtatctagcatgtgctctcatggtcagaggaaatgtagaaat ttctgatgtcagaaggaatatagaaagacttaaacctaacctaaaatttatccactggaaccaggagggatggaagacag gactgtgttctgtaccccccgttggtcagccctactcactactgaccctagccaacaatacgtgtgttcataactcattc tcagatctcagagacagatttaacaggctatataagagaaaggcccacgtacatcactacacccatgttgatggtatgga gataacagattttagtgagagcttggaatctctcaattctttagttcaggagtatgtaacattagaacaacaaatgaaca aacctgcccaatcagaaccaaggctgcaagttctaagctga |
|
Protein
| Protein ID | pfu_aug1.0_20407.1_25867.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20407.1_25867.t1 TGSGVGTYTLNLLADEYPDVYRFVTAVYPSADDDVITSPYNSVLAMRELTDKADCVLPIENQSLVDIVNKIGQAVPSAKM GKRVFAASGVKSGSALTAGEGGLSKPSDERPFDSMNNIVANLLLNLTSSARFEGSLNVDLNEITMNLVPFPRLHYLVASQ TPLYALADVNLPPRRLDQMFSDAFSRDHQLIKADPKHSLYLACALMVRGNVEISDVRRNIERLKPNLKFIHWNQEGWKTG LCSVPPVGQPYSLLTLANNTCVHNSFSDLRDRFNRLYKRKAHVHHYTHVDGMEITDFSESLESLNSLVQEYVTLEQQMNK PAQSEPRLQVLS |
|