Gene
| Gene Model ID | pfu_aug1.0_2042.1_15688 |
|---|---|
| Locus | scaffold2042.1 : 8084 ... 18975 : - |
| To GenomeBrowser | scaffold2042.1:8084..18975 |
| Genes list of scaffold | scaffold2042.1 |
| Synonym | pfu_aug2.0_443.1_10782 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2042.1_15688.t1 | 2 | 1 | IRS | 23 | 44 | 1.8e-20 | 72.3 | 0.7 | 10000.0 | -3.9 |
| pfu_aug1.0_2042.1_15688.t1 | 2 | 2 | IRS | 77 | 158 | 1.8e-20 | 72.3 | 3.3e-24 | 4.8e-20 | 71.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2042.1_15688.t1 | gi|213514866|ref|NP_001133656.1| | docking protein 2 [Salmo salar] | 3.0e-12 |
Transcript
| Transcript ID | pfu_aug1.0_2042.1_15688.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2042.1_15688.t1 atggaaaacttaaaggaagacgagatagacaaagtgtcgaaaaaatcctccaaggaatattacatagatttaccgcttaa aaaggagaagataactctaatgctggattctggagatgatgtagaagaatggtacactgctattgttcgtgcagtgacaa tggacgttcaagctgatggaatcagggaaaatttactgtatcagtcccaagatagtggatcagcttacacgttcactgtc ggcattaaggaaacagacgcttccatgagaatgaggttggagggatcctacaatcttattgtcacaccaaactcacttat tctggaagataaggcatcaaaggaatcaaagtgcatttggtcatttgaatttattcgtcgctacggaatggaaaagaaaa caggaatattcaccatagaagccggaaggcgatgctccactggtgagggcaagtttgaactgactgtgacttcaaacgat cttattgctttgccgaatgctattgatatgcaggtcaaaaagagagctgaacctagtgctaatatttcatcacaacttgg ggtgtctgatcaaaagaaacccaaagataagtcccaaaaatcacagaggaattctcaacctctaccccttagccttcaat taaatgaacaatcgcagaaagaacacagaataagtttaaagtctcagcatccttcccagctaacaccagagttcaaacaa gaattagaggaacatatttcacacccccctcccccttcaccttcaacagaaaaggagccaaaaaccaaagataaacatag atcaaaaggatttagtctgtttggaaacaaagacaagaaaaaatccttcgaaaggaaaagtgatggaagggatggaaaag gtgactcgaagcaacaaaatggcgtcaaaggagaagttaatgttaaaactgaaattcaaaaggaggaggccctatatgat gaggcagtcactgatgctgaaaggaaattgatactaaaagggggagataattgctatgaagaggcagaacccatgcgaca gtacgcatggaaaaatatgggacaattagaagaggatcacgaagaagactatgacagaataaaaaaggcagcattggaaa ataaagataaaggtgtagaaaatttgccgagagtagacgacgatgaggaagatgaaatgtacgatcgtgtcgatttgaac atgcaagaagcacggaaaaaatctattcaaaataattctgactctgctcacatttatggtttcagttcgggtaaagcatt aggggagattcccgatgatgaggactatgcgacaccagatgtgataccacaaggtgatgatcatacagaaaatgactatg aatatgaggacgacgatgacccgtacgatgatacagccttaaatgacaatactgaaaagactgaatacacggatgccata tcagttcagcaaaaaccacctgttacgagtcggccggttcctaaacggcgagctcctgtctatgaggaggttcagtga |
|
Protein
| Protein ID | pfu_aug1.0_2042.1_15688.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2042.1_15688.t1 MENLKEDEIDKVSKKSSKEYYIDLPLKKEKITLMLDSGDDVEEWYTAIVRAVTMDVQADGIRENLLYQSQDSGSAYTFTV GIKETDASMRMRLEGSYNLIVTPNSLILEDKASKESKCIWSFEFIRRYGMEKKTGIFTIEAGRRCSTGEGKFELTVTSND LIALPNAIDMQVKKRAEPSANISSQLGVSDQKKPKDKSQKSQRNSQPLPLSLQLNEQSQKEHRISLKSQHPSQLTPEFKQ ELEEHISHPPPPSPSTEKEPKTKDKHRSKGFSLFGNKDKKKSFERKSDGRDGKGDSKQQNGVKGEVNVKTEIQKEEALYD EAVTDAERKLILKGGDNCYEEAEPMRQYAWKNMGQLEEDHEEDYDRIKKAALENKDKGVENLPRVDDDEEDEMYDRVDLN MQEARKKSIQNNSDSAHIYGFSSGKALGEIPDDEDYATPDVIPQGDDHTENDYEYEDDDDPYDDTALNDNTEKTEYTDAI SVQQKPPVTSRPVPKRRAPVYEEVQ |
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