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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_20470.1_04085
Locus scaffold20470.1 : 3846 ... 9521 : +
To GenomeBrowser scaffold20470.1:3846..9521
Genes list of scaffold scaffold20470.1
Synonym pfu_aug2.0_1.1_03369

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_20470.1_04085.t1 gi|163637067|gb|ABY27350.1| ribosomal protein L35 [Crassostrea gigas] 2.0e-16

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-4cell 1
8-16cell 1
egg-Dshape 1
trochophore 1
>Adult tissues
Dshape 1
adductorMuscle 1
maleGonad 1
mantleEdge 1
mantlePallium 1
pearlSac 1

Transcript
Transcript IDpfu_aug1.0_20470.1_04085.t1
Definition-
>pfu_aug1.0_20470.1_04085.t1
atgacccctattgattttggtgtcaaaaggtcaagacgagtggtgaggaagtccattgcccgtgttttgacagtaattca
tcagactcagaaagataacctgaggaaatactacaaatctaagaagttcaagcccaaggacatccgagctaagaagacga
gggccatgagacgagctctcacccccatacgaaaagagcctcaaaactaa

Protein
Protein IDpfu_aug1.0_20470.1_04085.t1
Definition-
>pfu_aug1.0_20470.1_04085.t1
MTPIDFGVKRSRRVVRKSIARVLTVIHQTQKDNLRKYYKSKKFKPKDIRAKKTRAMRRALTPIRKEPQN

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