Gene
| Gene Model ID | pfu_aug1.0_20470.1_04086 |
|---|---|
| Locus | scaffold20470.1 : 19354 ... 20970 : - |
| To GenomeBrowser | scaffold20470.1:19354..20970 |
| Genes list of scaffold | scaffold20470.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_20470.1_04086.t1 | 3 | 1 | Kelch_1 | 1 | 29 | 3.0e-33 | 113.0 | 7.4e-10 | 1.8e-06 | 27.3 |
| pfu_aug1.0_20470.1_04086.t1 | 3 | 1 | Kelch_3 | 1 | 39 | 2.5e-13 | 49.7 | 2.5e-06 | 0.0063 | 16.6 |
| pfu_aug1.0_20470.1_04086.t1 | 3 | 1 | Kelch_6 | 2 | 32 | 1.1e-16 | 60.1 | 7.7e-07 | 0.0019 | 18.2 |
| pfu_aug1.0_20470.1_04086.t1 | 3 | 1 | Kelch_2 | 5 | 28 | 9.9e-10 | 37.8 | 0.00063 | 1.6 | 8.6 |
| pfu_aug1.0_20470.1_04086.t1 | 3 | 1 | Kelch_4 | 8 | 28 | 2.4e-13 | 49.6 | 7.7e-05 | 0.19 | 11.5 |
| pfu_aug1.0_20470.1_04086.t1 | 3 | 2 | Kelch_1 | 31 | 70 | 3.0e-33 | 113.0 | 1.2e-18 | 3.0e-15 | 55.4 |
| pfu_aug1.0_20470.1_04086.t1 | 3 | 2 | Kelch_4 | 31 | 70 | 2.4e-13 | 49.6 | 5.7e-10 | 1.4e-06 | 27.9 |
| pfu_aug1.0_20470.1_04086.t1 | 3 | 2 | Kelch_2 | 31 | 70 | 9.9e-10 | 37.8 | 1.5e-09 | 3.7e-06 | 26.4 |
| pfu_aug1.0_20470.1_04086.t1 | 3 | 2 | Kelch_6 | 32 | 70 | 1.1e-16 | 60.1 | 3.2e-11 | 7.9e-08 | 32.1 |
| pfu_aug1.0_20470.1_04086.t1 | 3 | 2 | Kelch_3 | 42 | 87 | 2.5e-13 | 49.7 | 5.7e-09 | 1.4e-05 | 25.0 |
| pfu_aug1.0_20470.1_04086.t1 | 3 | 3 | Kelch_6 | 79 | 113 | 1.1e-16 | 60.1 | 0.00038 | 0.95 | 9.7 |
| pfu_aug1.0_20470.1_04086.t1 | 3 | 3 | Kelch_1 | 80 | 111 | 3.0e-33 | 113.0 | 1.3e-11 | 3.2e-08 | 32.9 |
| pfu_aug1.0_20470.1_04086.t1 | 3 | 3 | Kelch_2 | 83 | 98 | 9.9e-10 | 37.8 | 0.041 | 100.0 | 2.9 |
| pfu_aug1.0_20470.1_04086.t1 | 3 | 3 | Kelch_4 | 85 | 111 | 2.4e-13 | 49.6 | 0.0011 | 2.6 | 7.8 |
| pfu_aug1.0_20470.1_04086.t1 | 3 | 3 | Kelch_3 | 90 | 111 | 2.5e-13 | 49.7 | 0.0015 | 3.6 | 7.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_20470.1_04086.t1 | gi|291236392|ref|XP_002738123.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_20470.1_04086.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20470.1_04086.t1 tgggaggatggtgcagtggtgatgccatatcaagtgtagagaagtttgatcctcagaccagcgagtggcgcatggtggca cccatgtcaaagcggcgctgtggtgtaggggtggctgtgctaaatgacctgctatacgctgtaggggggcatgatggcca atcataccttaacagtatagaaaggtttgatccccagacaaaccagtggagtggtgatgtagcaccgaccagttcttgcc gtacgagtgttggagtagccgtattagaaaattacatgtatgctgtaggtggacaggatggagtatcatgtctaaatttt gtagagaggtattcttggaaatcttatgtcaaaatttgtaggggaatatag |
|
Protein
| Protein ID | pfu_aug1.0_20470.1_04086.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20470.1_04086.t1 GGWCSGDAISSVEKFDPQTSEWRMVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERFDPQTNQWSGDVAPTSSCR TSVGVAVLENYMYAVGGQDGVSCLNFVERYSWKSYVKICRGI |
|