Gene
| Gene Model ID | pfu_aug1.0_20485.1_62011 |
|---|---|
| Locus | scaffold20485.1 : 7196 ... 26895 : + |
| To GenomeBrowser | scaffold20485.1:7196..26895 |
| Genes list of scaffold | scaffold20485.1 |
| Synonym | pfu_aug2.0_281.1_03925 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_20485.1_62011.t1 | 1 | 1 | ABC_tran | 75 | 224 | 8.6e-24 | 84.3 | 9.1e-27 | 1.4e-23 | 83.7 |
| pfu_aug1.0_20485.1_62011.t1 | 2 | 1 | AAA_21 | 86 | 108 | 4.6e-09 | 36.6 | 1.9e-06 | 0.0028 | 17.6 |
| pfu_aug1.0_20485.1_62011.t1 | 2 | 2 | AAA_21 | 172 | 252 | 4.6e-09 | 36.6 | 5.8e-06 | 0.0086 | 16.0 |
| pfu_aug1.0_20485.1_62011.t1 | 2 | 1 | ABC2_membrane | 330 | 524 | 4.6e-29 | 101.0 | 3.1e-32 | 4.6e-29 | 101.0 |
| pfu_aug1.0_20485.1_62011.t1 | 1 | 1 | ABC2_membrane_3 | 355 | 575 | 1.5e-06 | 27.4 | 1.4e-09 | 2.1e-06 | 27.0 |
| pfu_aug1.0_20485.1_62011.t1 | 2 | 2 | ABC2_membrane | 559 | 574 | 4.6e-29 | 101.0 | 0.59 | 870.0 | -1.1 |
Transcript
| Transcript ID | pfu_aug1.0_20485.1_62011.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20485.1_62011.t1 atggagagatcatcttcaagggagaggctgttaaatccaggagaagattcatatggatctatgaccaccaaaatgaacgg cggacacactgtggatgtggatgtggagaggcaattttcaaagagcggagatgtgaagggatctaccatttcagctcatg acgtgcattacagtgttatggtcagggacaagccttgtggagacaggaggaggaaggacatcctgaaaaacattgactgc atcttcaagccaggaatgaacgcaattttagggccaacgggtagtggaaaatcatcgttactggatatattggcagggag gaaggaccctgctggtttacaggggacaatacttatagacggggcacctccccctgataatttcaaatgcatggtgggat atgttgtgcaggatgacgtagtgatgggaaccctgacagtgagagagaacttcgccttttcagctgctctaagactacca ggtagcatatcagacaatgagaggaaagagagagtggataatgttataagtgaactgggactctctgaatgtgctgatac caaggtagggacagagtttatcagaggagtatcagggggagagagaaagaggaccaacattggtatggagttgattatct cccctcccgtcctatttctggatgaaccaacaacaggattggacgccaatactgccaactctgtcatgttgttactcaga aggttggccctgaggggaagaactatcatattttccattcaccagcctcgttactccatttatcgtctatttgatactct gatgatgttgtctctaggagaaactgtataccacggaacaagcaaagaggcactagactactttaaaacaataggttacg agatagaggaacacaataacccacctgacttctttcttgacgtcatcagcggtgacgtaaatgttgatgtagaaacaata cacccaaaacatgtaatcctgaccttgaccttttacatacggtacttaatagaaaatgacatttatactaacaaagatgc caccggggatattcgtgtttcacaagcacagggtttatttcggttattttcagtgggtgccttcttctttatcgttatga atcaggtgtttggtaatctatcagctgtggaattattcatcaaagaacgagccatctttatacatgagaatgtgagcggc ttctacagagtatccgcctactttatagctaaaatttgttgtgatgtgctcccaatgcgtctgtttccagttactatatt ttctgtcatcacttttttcatgataggatttgagatgtcagtggaaaagtacttcatctaccttttagcattatttggat cgtccatttccgcttccgggctggccttctttttcagtgccacagttcaaatttttgccatagccaatctatgtatagct ttgtgttatgtctttatgatggtttttagtggtttccttttaaacatccaatcaatagcagagtggttgaggtggatcca gtgggtcagcatattccgtctagctatcagtgcacttgcaataaatgaactcaaaggacaagtgtacactaatggaacaa taacatgtgggaccggagaagcatacctcgatgcacaagcgattgcctacgacacagactttgatctctggaagaacatt atggccatgttcattatagcagtggtttttatgggattggcatatgtacagctcagacgacttaaaaagatgaagtag |
|
Protein
| Protein ID | pfu_aug1.0_20485.1_62011.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20485.1_62011.t1 MERSSSRERLLNPGEDSYGSMTTKMNGGHTVDVDVERQFSKSGDVKGSTISAHDVHYSVMVRDKPCGDRRRKDILKNIDC IFKPGMNAILGPTGSGKSSLLDILAGRKDPAGLQGTILIDGAPPPDNFKCMVGYVVQDDVVMGTLTVRENFAFSAALRLP GSISDNERKERVDNVISELGLSECADTKVGTEFIRGVSGGERKRTNIGMELIISPPVLFLDEPTTGLDANTANSVMLLLR RLALRGRTIIFSIHQPRYSIYRLFDTLMMLSLGETVYHGTSKEALDYFKTIGYEIEEHNNPPDFFLDVISGDVNVDVETI HPKHVILTLTFYIRYLIENDIYTNKDATGDIRVSQAQGLFRLFSVGAFFFIVMNQVFGNLSAVELFIKERAIFIHENVSG FYRVSAYFIAKICCDVLPMRLFPVTIFSVITFFMIGFEMSVEKYFIYLLALFGSSISASGLAFFFSATVQIFAIANLCIA LCYVFMMVFSGFLLNIQSIAEWLRWIQWVSIFRLAISALAINELKGQVYTNGTITCGTGEAYLDAQAIAYDTDFDLWKNI MAMFIIAVVFMGLAYVQLRRLKKMK |
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