Gene
| Gene Model ID | pfu_aug1.0_205.1_22085 |
|---|---|
| Locus | scaffold205.1 : 44906 ... 65819 : + |
| To GenomeBrowser | scaffold205.1:44906..65819 |
| Genes list of scaffold | scaffold205.1 |
| Synonym | pfu_aug2.0_445.1_17438 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_205.1_22085.t1 | 5 | 1 | Laminin_EGF | 136 | 152 | 5.6e-08 | 32.5 | 0.39 | 570.0 | 0.5 |
| pfu_aug1.0_205.1_22085.t1 | 5 | 2 | Laminin_EGF | 155 | 198 | 5.6e-08 | 32.5 | 3.6e-05 | 0.053 | 13.4 |
| pfu_aug1.0_205.1_22085.t1 | 5 | 3 | Laminin_EGF | 197 | 246 | 5.6e-08 | 32.5 | 0.026 | 39.0 | 4.2 |
| pfu_aug1.0_205.1_22085.t1 | 5 | 4 | Laminin_EGF | 251 | 292 | 5.6e-08 | 32.5 | 0.00023 | 0.35 | 10.8 |
| pfu_aug1.0_205.1_22085.t1 | 5 | 5 | Laminin_EGF | 290 | 318 | 5.6e-08 | 32.5 | 0.013 | 19.0 | 5.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_205.1_22085.t1 | gi|345495719|ref|XP_001606322.2| | PREDICTED: multiple epidermal growth factor-like domains protein 10 isoform X2 [Nasonia vitripennis] | 9.00054e-42 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_205.1_22085.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_205.1_22085.t1 atgactgtgagtgtgatcctgggtggagaggtccagactgctcatcaaactgcagtgctgagacatggggtccatactgt cagagtgtatgtgattgtagcggtcacggacaatgtgatatcaactctggtcactgtgtatgtgctgcagtgtgcccttt atggagatacggcagtgactgtctcagtgtatgtgattgtgatgaaagcacttcagacagctgtcatcctgggacagggc gttgtaattgcgcaccgggatttagcggaccgatatgtaacgagacctgtcctgtaccgtattatggtgtcaagtgctca caagtctgtcactgtcaaaacggaggcatgtgccatccagtcactggtgaatgtcaatgtaggccaggattcacagggga cctgagttgactgtaacagtaactgtgctgatggtctgtggggatctgattgtacaaggtcatgtgactgtaagaacgag gggtcatgtgatcagaacactggtacatgtatatgccgtgctggcttcatcgggaatgactgctcacattcttgtgacca gggccgctatggtcatagatgtgagagggattgtagccaacactgtcctggtaacctgacctgccatcatgtgactggtc agtgtatgtcactgtcgtgcccacctggtaggatgggtatcacatgtgaacttgtttgtccctctggttactatggacag ggttgtaaccaagtttgtcctgcatgtcagaatggtgctatatgtaatgtaaggactggacaatgtgactgtctgcttgg ctactctggaaacctctgtcagaacaaatgtccatcaggttactatggactagcatgtaaacataagtgtgagtgtgtta atggagcagattgtagtgctactaacggagagtgtagctgtccacctggtagattaggtgtcacatgtgctcagagcttt caagagcaagttgaagagttgaagtcagaccagttatcgagcggtgctgtagcgggaattgttttggctgtgatattggt tgctgttatcgttatcatgatggttatctattacaaaagacgtgtgggtagactaaaggctgagaatagagctgttatgt cctacatcaactccacagagggcggaaatgtccaccaaaccagagaattacctggaatagagaatccagtatacagcaat tcaaaccagaatgtaacgaatctggagcgtgaggttgagcgacaacgtcagagaaggtcccaatgtccaagtggactacc accatgtgcagaaagcacgtcaacagactgtaaggtaatgccagaggacaatgccacatgtgctacaaatgttggatatg tggacgatgatgagatggatcgttacacaactatgaaggatttccataacagcctcactgactcaacgtttgccggaggt gctacaggtggttcagaaaaaggtgtaactaaggacttcctatactataacaataatctgaaagtagacctcgatatggc cgcggagaaaaatagtagtccccctcctgactatgataatatatctgttgaatctgtcgactccatagaattagaaaaaa gtaacaataagtcatggtctttgtattga |
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Protein
| Protein ID | pfu_aug1.0_205.1_22085.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_205.1_22085.t1 MTVSVILGGEVQTAHQTAVLRHGVHTVRVYVIVAVTDNVISTLVTVYVLQCALYGDTAVTVSVYVIVMKALQTAVILGQG VVIAHRDLADRYVTRPVLYRIMVSSAHKSVTVKTEACAIQSLVNVNVGQDSQGTXVDCNSNCADGLWGSDCTRSCDCKNE GSCDQNTGTCICRAGFIGNDCSHSCDQGRYGHRCERDCSQHCPGNLTCHHVTGQCMSLSCPPGRMGITCELVCPSGYYGQ GCNQVCPACQNGAICNVRTGQCDCLLGYSGNLCQNKCPSGYYGLACKHKCECVNGADCSATNGECSCPPGRLGVTCAQSF QEQVEELKSDQLSSGAVAGIVLAVILVAVIVIMMVIYYKRRVGRLKAENRAVMSYINSTEGGNVHQTRELPGIENPVYSN SNQNVTNLEREVERQRQRRSQCPSGLPPCAESTSTDCKVMPEDNATCATNVGYVDDDEMDRYTTMKDFHNSLTDSTFAGG ATGGSEKGVTKDFLYYNNNLKVDLDMAAEKNSSPPPDYDNISVESVDSIELEKSNNKSWSLY |
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