Gene
| Gene Model ID | pfu_aug1.0_2051.1_58749 |
|---|---|
| Locus | scaffold2051.1 : 9371 ... 17155 : - |
| To GenomeBrowser | scaffold2051.1:9371..17155 |
| Genes list of scaffold | scaffold2051.1 |
| Synonym | pfu_aug2.0_707.1_24327 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2051.1_58749.t1 | 1 | 1 | Proteasome | 23 | 171 | 2.2e-24 | 85.8 | 1.9e-28 | 2.8e-24 | 85.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2051.1_58749.t1 | gi|156365620|ref|XP_001626742.1| | predicted protein [Nematostella vectensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2051.1_58749.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2051.1_58749.t1 atgaaaagaaaaatatcaccaaacaaagtacaatttaactttgatgacgtcatgaacactggatctacggtattaggagc ctgtggtttccatggtgatgttcttacccttacaaaagtccttcaagccagattaaagatatatgagcatgatcataatg agaagatgtctacaccagccatagctgccatgttgtccaccatgttatattaccgcagatttttcccttattacgtatat aatattgttgctggtattgatgaccaaggtaagggatgtgttttcagttttgatcctgtaggatcgtatgaaagagaatc ctacagagctggaggatcagccagtgctatgcttcaacctttactagataatcagattggctttaagaatcaagagaatg tgaccaaaacatctttatcacaggagaaagccgtcaatctagtgaaggatgtgttcatctcggcagcggagagggacatt tatactggtgatgctattgtaataaacgtcatcaccaaagatggtgttaaggaggaacgatttgaactgagaagagatta g |
|
Protein
| Protein ID | pfu_aug1.0_2051.1_58749.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2051.1_58749.t1 MKRKISPNKVQFNFDDVMNTGSTVLGACGFHGDVLTLTKVLQARLKIYEHDHNEKMSTPAIAAMLSTMLYYRRFFPYYVY NIVAGIDDQGKGCVFSFDPVGSYERESYRAGGSASAMLQPLLDNQIGFKNQENVTKTSLSQEKAVNLVKDVFISAAERDI YTGDAIVINVITKDGVKEERFELRRD |
|