Gene
| Gene Model ID | pfu_aug1.0_20539.1_47393 |
|---|---|
| Locus | scaffold20539.1 : 6377 ... 7495 : - |
| To GenomeBrowser | scaffold20539.1:6377..7495 |
| Genes list of scaffold | scaffold20539.1 |
| Synonym | pfu_aug2.0_127.1_23515 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_20539.1_47393.t1 | 1 | 1 | CARD | 244 | 320 | 3.3e-06 | 26.8 | 2.6e-09 | 9.6e-06 | 25.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_20539.1_47393.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20539.1_47393.t1 atgctaataaagatccagaacttccaaacagaattttcggatcatttgagggtggcaaacacaggcacgcctctcaaacc ttggcatactttggctacactaaggaaatctggagaaatcagcattcaatttatcgacaacaatgaaatcaggatagatg aaaacttgtacccattacgacgtcatccaggtacagaccatgctatttgcttagttttcgaagtgtttcgtgtaggtata acagttcttggtatggaagaagtagacttatcgcaatttcgagacttagatccttaccaggaaatttcacatcgggttga ttcaagagttcaagctgtagaaagtagtttacaaggtggaagtcaattagtgaactttccagaagtagaagaacttgaag atttaaagctagacattgaaaatgcatacctcgatccattgccgacgaaacctatctccagtggttattgtaaaattttg tcatccgagattttatatgatagaaatcaacagagagattccgtcgatcgcatttatgataagattcaacatatcagcca gtcaatggaggaattaaagaaacaaggtcagagaccaggttcagatcttgcagtgcaaaaagttgaggagatacgagaat tattagaaaaacttctagatccgcgatctcctgtaccgtcaatcaatgatgagagccctttggataaaaccaatttagaa aaaataaggtcccaactaagaaagaactatcagaaaatcatcagtgatctagatttgataagtcttatcgacattctatt tcagaaagaagtattgagcttcactgaatatgaagaccttcgtgacaaacacaagaatcatagaaaagatgcaaacaggg atttcgttggaatatgcttaaaaagaccttttaacgttgccgagtttgtgcaggcattcaaggacacaaatcagggcttt cttctttcaatgcatcaatag |
|
Protein
| Protein ID | pfu_aug1.0_20539.1_47393.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20539.1_47393.t1 MLIKIQNFQTEFSDHLRVANTGTPLKPWHTLATLRKSGEISIQFIDNNEIRIDENLYPLRRHPGTDHAICLVFEVFRVGI TVLGMEEVDLSQFRDLDPYQEISHRVDSRVQAVESSLQGGSQLVNFPEVEELEDLKLDIENAYLDPLPTKPISSGYCKIL SSEILYDRNQQRDSVDRIYDKIQHISQSMEELKKQGQRPGSDLAVQKVEEIRELLEKLLDPRSPVPSINDESPLDKTNLE KIRSQLRKNYQKIISDLDLISLIDILFQKEVLSFTEYEDLRDKHKNHRKDANRDFVGICLKRPFNVAEFVQAFKDTNQGF LLSMHQ |
|