Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2055.1_15691
Locus scaffold2055.1 : 8506 ... 11995 : +
To GenomeBrowser scaffold2055.1:8506..11995
Genes list of scaffold scaffold2055.1
Synonym pfu_aug2.0_5477.1_26072

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2055.1_15691.t1 gi|225716822|gb|ACO14257.1| Nitrilase homolog 2 [Esox lucius] 9.80909e-45

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
mantle 1

Transcript
Transcript IDpfu_aug1.0_2055.1_15691.t1
Definition-
>pfu_aug1.0_2055.1_15691.t1
atgcaatttcaatgtttgaccgaggttcgaagcttgtttgtccgaggaaagtgcaaggttggaatcggaatctgtattga
tatcaggtatccggaaatatgcaggttatatacggagagaggatgcaagttgcagctatttttgggagcattcagcgcac
taaaaacaggtccggctcattgggaggtggtacaacgagctcgtgcaatagacaatcaggtgttcatagcaacatgtgcc
cccgccagggatgatacggcacactacgcctcttggggccatagcatggtggtcgacccatggggcaaaataatatcttc
tgctggggaagaggaatgcattgttcatgcagaattagacttagattacataggagatgttagaacgaaactaccattgg
aaaacatcagacgaaaggatttatatacaataaagtatatgggagattga

Protein
Protein IDpfu_aug1.0_2055.1_15691.t1
Definition-
>pfu_aug1.0_2055.1_15691.t1
MQFQCLTEVRSLFVRGKCKVGIGICIDIRYPEICRLYTERGCKLQLFLGAFSALKTGPAHWEVVQRARAIDNQVFIATCA
PARDDTAHYASWGHSMVVDPWGKIISSAGEEECIVHAELDLDYIGDVRTKLPLENIRRKDLYTIKYMGD

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495