Gene
| Gene Model ID | pfu_aug1.0_2055.1_15695 |
|---|---|
| Locus | scaffold2055.1 : 46692 ... 52945 : - |
| To GenomeBrowser | scaffold2055.1:46692..52945 |
| Genes list of scaffold | scaffold2055.1 |
| Synonym | pfu_aug2.0_3829.1_32561 |
Manual annotation
| Study field | Reproduction |
|---|---|
| Gene name | C1q domain containing protein |
| Description | Best hit to MgC1q36, 65 bits, 4e-09 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2055.1_15695.t1 | 1 | 1 | C1q | 36 | 157 | 1.9e-18 | 66.7 | 3.1e-22 | 2.3e-18 | 66.4 |
Transcript
| Transcript ID | pfu_aug1.0_2055.1_15695.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2055.1_15695.t1 atgcaacacccgtcgcaacagctccatggaaacctgtcaaatgcggagattgtctctatgtatattttgatgtacagatc aggtgtagcgtgtgaaaaaccagtcgtattttcgactcgcctctccaagaacttgtacccccttggcaaaaatcagatta ttacttacgacgatgtgcttaccaatgtggaaggtggatatgacaaggttaccggcattttcgaggcaccatttgctggc ctgtaccagttgatagcaacaatgtggtcaaacgatggctaccaagtggacatagaaatgattcacaatggaactgatgt ctgctacgctaaatcaacatctaagaatcagtctatgagcatgtgtgctagtgttatatccatgcaggaaaacggtcggg tgtgggtcaggcatctcaacaacataggcaactacgcttatgggaacctctacgccactttttcgggtcataagataatg tag |
|
Protein
| Protein ID | pfu_aug1.0_2055.1_15695.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2055.1_15695.t1 MQHPSQQLHGNLSNAEIVSMYILMYRSGVACEKPVVFSTRLSKNLYPLGKNQIITYDDVLTNVEGGYDKVTGIFEAPFAG LYQLIATMWSNDGYQVDIEMIHNGTDVCYAKSTSKNQSMSMCASVISMQENGRVWVRHLNNIGNYAYGNLYATFSGHKIM |
|