Gene
| Gene Model ID | pfu_aug1.0_20588.1_54688 |
|---|---|
| Locus | scaffold20588.1 : 4086 ... 5912 : + |
| To GenomeBrowser | scaffold20588.1:4086..5912 |
| Genes list of scaffold | scaffold20588.1 |
| Synonym | pfu_aug2.0_1734.1_15216 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_20588.1_54688.t1 | 2 | 1 | zf-B_box | 17 | 57 | 9.3e-15 | 54.2 | 1.8e-09 | 5.4e-06 | 26.1 |
| pfu_aug1.0_20588.1_54688.t1 | 2 | 2 | zf-B_box | 73 | 109 | 9.3e-15 | 54.2 | 2.8e-13 | 8.4e-10 | 38.3 |
Transcript
| Transcript ID | pfu_aug1.0_20588.1_54688.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20588.1_54688.t1 atggcgtttgcctcgtcaaagattgaggctcaggaggctattattaagccgtgtgatctatgtgaagatgatgaaaacgt gaactggttctgtaaggactgtgatcaaagcctatgtgacagatgtaaaaggctacatcttcgcagcaatatttctaagt cccacattgtactttcgatttctgaaggatttgctatgggaaaaatgaatatatcaaatatgtgtcgaatccatgacgaa ccatttcaattcttctgtaggacttgtgataggaatatctgtgcgaaatgtttgtcaacaaagcacaagaaacatgattt catagatttgcatgacctgcaatcagaggttcagaagcagttagatgacgtcatcaaagaaaaggaagacgaagtacaga aaatgaccaaagctcacgatgatttggatcagcatgaaaatgagtcggaaaattacttaaaggagaagtatgcttcaatc gacgtaaatgtcaaagccatccaaaaatccgctgctgaagaaggagagaaaatgaagcaatctcttcatgaaagaattga acaacacgataaagaagtcaaggaaggaaaacaaaaaattcaaggtcaaactaaagttcacagaaatgagatccatactg ttcaacagaaacttcgacttcagactgcgtcatcatgcaataactttgtcaaggagtcaaagtcaaaacttcagtccctc cggtttttatctataacgattccggatataagtcaattgtttgcagaaggaagagttgatagaaatcaaatccgacaaat gattggaaacataggaaagatggctaaagtatcagttacggaagattcaaaaggaaatgacgaaacaacaagaggcaatg ttttatcaaaaggtaaggacgaaacaacaacaggcaatgttttatcacagcttgaaattattcgtactttgaaactgaat aaaaaagaggaatgttactgtatgtgtctcagtcctgatggtagtatatggattggtggttatggagtcgtgtacaagat gacttctgactgctctacagtcctccatcagatacctgctagggagtgttggtggtcatgtgattacatatcatgtttac agtcaggtgatgctgttgtatcttatggtgttccatcctacgtagacagatttacctctgatgggagaagagtggacttc gcagacctatcatggaggttaacttacgatatagccgtcaataaccatgacgaggttgttgtcaatgttagcaatacatc cttaatcatcttctccaacaatggaaaacaactcagagaaatcaatgtaaatggaggcatccagacattttgcatagaca gaaacggaaactttatcatagcacatcttaactcctccaacanaaaattcttgtcgcaaaatatttag |
|
Protein
| Protein ID | pfu_aug1.0_20588.1_54688.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20588.1_54688.t1 MAFASSKIEAQEAIIKPCDLCEDDENVNWFCKDCDQSLCDRCKRLHLRSNISKSHIVLSISEGFAMGKMNISNMCRIHDE PFQFFCRTCDRNICAKCLSTKHKKHDFIDLHDLQSEVQKQLDDVIKEKEDEVQKMTKAHDDLDQHENESENYLKEKYASI DVNVKAIQKSAAEEGEKMKQSLHERIEQHDKEVKEGKQKIQGQTKVHRNEIHTVQQKLRLQTASSCNNFVKESKSKLQSL RFLSITIPDISQLFAEGRVDRNQIRQMIGNIGKMAKVSVTEDSKGNDETTRGNVLSKGKDETTTGNVLSQLEIIRTLKLN KKEECYCMCLSPDGSIWIGGYGVVYKMTSDCSTVLHQIPARECWWSCDYISCLQSGDAVVSYGVPSYVDRFTSDGRRVDF ADLSWRLTYDIAVNNHDEVVVNVSNTSLIIFSNNGKQLREINVNGGIQTFCIDRNGNFIIAHLNSSNXKFLSQNI |
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