Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_20591.1_04093
Locus scaffold20591.1 : 1 ... 22390 : -
To GenomeBrowser scaffold20591.1:1..22390
Genes list of scaffold scaffold20591.1
Synonym pfu_aug2.0_528.1_27502

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_20591.1_04093.t1 1 1 RCC1 1 48 4.2e-11 42.8 7.3e-15 5.4e-11 42.5
pfu_aug1.0_20591.1_04093.t1 2 1 RCC1_2 2 11 3.8e-06 26.3 3.2e-06 0.024 14.2
pfu_aug1.0_20591.1_04093.t1 2 2 RCC1_2 36 54 3.8e-06 26.3 6.3e-06 0.047 13.3

Transcript
Transcript IDpfu_aug1.0_20591.1_04093.t1
Definition-
>pfu_aug1.0_20591.1_04093.t1
atttatgcttggggacagaataactgcggtcaagttggttctggaaccactacaaatcaacccactccacgtaaagtgat
ggctgtaataggtaccaaggtggcgtcatccatagcatgtggacagacttcctctatggccctgatggaaaatggagagg
tcagtatcggcaatattcagttcgttattcttaacgtcagatgtgaacatttccgctccatgttccagtcatgctgggat
gaagatgagaaagagtaa

Protein
Protein IDpfu_aug1.0_20591.1_04093.t1
Definition-
>pfu_aug1.0_20591.1_04093.t1
IYAWGQNNCGQVGSGTTTNQPTPRKVMAVIGTKVASSIACGQTSSMALMENGEVSIGNIQFVILNVRCEHFRSMFQSCWD
EDEKE

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