Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2065.1_00947
Locus scaffold2065.1 : 27354 ... 30465 : -
To GenomeBrowser scaffold2065.1:27354..30465
Genes list of scaffold scaffold2065.1
Synonym pfu_aug2.0_1192.1_08226

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_2065.1_00947.t1 1 1 Peptidase_A17 9 153 1.5e-31 109.4 1.9e-35 2.8e-31 108.5

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2065.1_00947.t1 gi|326673033|ref|XP_701288.5| 0.0

Transcript
Transcript IDpfu_aug1.0_2065.1_00947.t1
Definition-
>pfu_aug1.0_2065.1_00947.t1
atgctcaatttcgtgctctattgaatcgtatcaccatttgtaatgacagcgaagactttattgcagcagctttacaaaag
tggaatcaagttggatgataaatttgcaggaaaactggagaaatgttggacagcttggttctcacaagctaaagagttgg
aaagcgtgaagataccaagatgttataaacccagagacatggaccgcatagtgtcatgccaattacatgcatttgctgat
gcgagtgaagtcggaatgggtgtcgtcatatacatgcgtttaactgatgataataacagaatacattgttcatttgtatt
gggaatagcaagagccaccccattgaaggcagtcacaattccgaggctagaactgacagcttgtacaatggcagtaaaat
taagtaaagtgatagctgatcagttagagtacagtatagatgcgattcacttttggacggacagcatgtctgtacttcga
tatatagcgaatacaaagactcgctttaaaacattcgacgcaaatcgtcttgctgtgattcatgacgctacaacggtcta
tcagtggcactttgttcgatcagaagataacccagcagattgtgcatatagagggatacctacagtcagcaagtttcttg
actatagtccgtggcaagatggtccagaatttctatggaaaccggaatccacatggatacaaccagttgacctcgggaac
ttaaatctcgaagatgataaggaggtaaaatccaacttagctatgactcttactttatcatctcctaagggcttggaaag
actcatagaatatcattctggctggaaaagattgaaagcatcagttggatggtttctgaaagcaaaggacaatttgaaat
gtcggactagcaaagagaaggaaaataggaaagagagatcaaagaatgtatctacaaatatgtgtctcaccccgaatatt
ctagagagagcagagagatctctggttatgtttgtgcaaaggctacactttccaaaggaactggaggatattaacgctaa
aggagtgaagaaatcatctccactgtgcaagcttgatccgttcattcatgacggaatactgagagtgggtggacgtcttt
ctaatagcgagatctcatttgatgccaaacaccctattatcattccgaaggaaaaggtgctctactccgtgttacacgaa
cagacaaatcgtctcgatgacgaaggcctcataacagtattctgcgaggtagaggctatattgaatgggcgaccattgac
cagaatcacagatgaccctaatgacatgcgtgctcttacgccaaatcatttgttgctcttgcgacctggagagcatttcc
caccaggagtcttcgttaagagagacaactttgttcgtcgacgttggcgtcaaattcagtcccttgcaaatatcttttgg
acgcgatggatcaaagagtatttgccactcctacaaactcggcaaaagtggcttcagcctaaggataatccgaaagtagt
tgacatcgtgctgatcgtcgacaatggtccaagaaattcatggaatctcggcagaattagcgaaattctaaacaagaaag
atgatgttgtgcgcgtcgtaaaagtgaaaaccggttcatctgtgcttacacgacctgttacagttgtgccttgtgttata
gtcagaaattaa

Protein
Protein IDpfu_aug1.0_2065.1_00947.t1
Definition-
>pfu_aug1.0_2065.1_00947.t1
MLNFVLYXIVSPFVMTAKTLLQQLYKSGIKLDDKFAGKLEKCWTAWFSQAKELESVKIPRCYKPRDMDRIVSCQLHAFAD
ASEVGMGVVIYMRLTDDNNRIHCSFVLGIARATPLKAVTIPRLELTACTMAVKLSKVIADQLEYSIDAIHFWTDSMSVLR
YIANTKTRFKTFDANRLAVIHDATTVYQWHFVRSEDNPADCAYRGIPTVSKFLDYSPWQDGPEFLWKPESTWIQPVDLGN
LNLEDDKEVKSNLAMTLTLSSPKGLERLIEYHSGWKRLKASVGWFLKAKDNLKCRTSKEKENRKERSKNVSTNMCLTPNI
LERAERSLVMFVQRLHFPKELEDINAKGVKKSSPLCKLDPFIHDGILRVGGRLSNSEISFDAKHPIIIPKEKVLYSVLHE
QTNRLDDEGLITVFCEVEAILNGRPLTRITDDPNDMRALTPNHLLLLRPGEHFPPGVFVKRDNFVRRRWRQIQSLANIFW
TRWIKEYLPLLQTRQKWLQPKDNPKVVDIVLIVDNGPRNSWNLGRISEILNKKDDVVRVVKVKTGSSVLTRPVTVVPCVI
VRN

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495