Gene
| Gene Model ID | pfu_aug1.0_2069.1_29972 |
|---|---|
| Locus | scaffold2069.1 : 20607 ... 37745 : - |
| To GenomeBrowser | scaffold2069.1:20607..37745 |
| Genes list of scaffold | scaffold2069.1 |
| Synonym | pfu_aug2.0_393.1_10731 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2069.1_29972.t1 | 1 | 1 | Fibrinogen_C | 37 | 225 | 5.4e-28 | 98.1 | 4.7e-32 | 7.0e-28 | 97.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2069.1_29972.t1 | gi|344291673|ref|XP_003417558.1| | 4.0e-16 |
Transcript
| Transcript ID | pfu_aug1.0_2069.1_29972.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2069.1_29972.t1 atgaatgacacgtgtatttgtagtggaggatacgtgggacaaaactgtcaacgattggctacagagtgtggtgaactgct ccaatatccttggtatccaaaagctgagttgatagttcagatacagccgtcccttaatcttgacccgataacaatcgtat gtgaccttgacttattgaatccagttacaaacaaaaccagaaactacgtacaaaaacaccatcagctaggggtcaccttc aacaggttatgggacgattacaaaaacgggtttggagacctttcacaaaacgagtattggatcggaaacgaggctattca ccagctaacttcgtcatttccttcttcaacactagtcatcgaaatggctagtgagaattggttgggtatatggcagcaga cgtatgagggattcagggtcggtgatgaggcttcagagtacttgatgacttacacatctacatctccatacccggggaat tctggaatgggagattcgctgatacaagtaaataacacaatgttttgcactgcggatcacaacaataatatcgaccctaa tgtaaattgcgggacagttcgtcagtcaggattctggctgtgtgacccaggcaacaagtgtggacacggaaatccaaatg gtcagctaatgaaaactggaaatggtgaaattctctatgtttaccacgaagtattttggaatactttaaatgtaggaacg acctcgccatgggatatggtcattatccatatttgccagtaccaagccaagtgtccgtccgttcaaacatttacttcttg gcaaaagtggtttatttcaagtttacaattttgtgaaatttcaagacaaaataaagagtaa |
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Protein
| Protein ID | pfu_aug1.0_2069.1_29972.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2069.1_29972.t1 MNDTCICSGGYVGQNCQRLATECGELLQYPWYPKAELIVQIQPSLNLDPITIVCDLDLLNPVTNKTRNYVQKHHQLGVTF NRLWDDYKNGFGDLSQNEYWIGNEAIHQLTSSFPSSTLVIEMASENWLGIWQQTYEGFRVGDEASEYLMTYTSTSPYPGN SGMGDSLIQVNNTMFCTADHNNNIDPNVNCGTVRQSGFWLCDPGNKCGHGNPNGQLMKTGNGEILYVYHEVFWNTLNVGT TSPWDMVIIHICQYQAKCPSVQTFTSWQKWFISSLQFCEISRQNKE |
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