Gene
Gene Model ID | pfu_aug1.0_2069.1_29972 |
---|---|
Locus | scaffold2069.1 : 20607 ... 37745 : - |
To GenomeBrowser | scaffold2069.1:20607..37745 |
Genes list of scaffold | scaffold2069.1 |
Synonym | pfu_aug2.0_393.1_10731 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_2069.1_29972.t1 | 1 | 1 | Fibrinogen_C | 37 | 225 | 5.4e-28 | 98.1 | 4.7e-32 | 7.0e-28 | 97.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_2069.1_29972.t1 | gi|344291673|ref|XP_003417558.1| | 4.0e-16 |
Transcript
Transcript ID | pfu_aug1.0_2069.1_29972.t1 |
---|---|
Definition | - |
>pfu_aug1.0_2069.1_29972.t1 atgaatgacacgtgtatttgtagtggaggatacgtgggacaaaactgtcaacgattggctacagagtgtggtgaactgct ccaatatccttggtatccaaaagctgagttgatagttcagatacagccgtcccttaatcttgacccgataacaatcgtat gtgaccttgacttattgaatccagttacaaacaaaaccagaaactacgtacaaaaacaccatcagctaggggtcaccttc aacaggttatgggacgattacaaaaacgggtttggagacctttcacaaaacgagtattggatcggaaacgaggctattca ccagctaacttcgtcatttccttcttcaacactagtcatcgaaatggctagtgagaattggttgggtatatggcagcaga cgtatgagggattcagggtcggtgatgaggcttcagagtacttgatgacttacacatctacatctccatacccggggaat tctggaatgggagattcgctgatacaagtaaataacacaatgttttgcactgcggatcacaacaataatatcgaccctaa tgtaaattgcgggacagttcgtcagtcaggattctggctgtgtgacccaggcaacaagtgtggacacggaaatccaaatg gtcagctaatgaaaactggaaatggtgaaattctctatgtttaccacgaagtattttggaatactttaaatgtaggaacg acctcgccatgggatatggtcattatccatatttgccagtaccaagccaagtgtccgtccgttcaaacatttacttcttg gcaaaagtggtttatttcaagtttacaattttgtgaaatttcaagacaaaataaagagtaa |
Protein
Protein ID | pfu_aug1.0_2069.1_29972.t1 |
---|---|
Definition | - |
>pfu_aug1.0_2069.1_29972.t1 MNDTCICSGGYVGQNCQRLATECGELLQYPWYPKAELIVQIQPSLNLDPITIVCDLDLLNPVTNKTRNYVQKHHQLGVTF NRLWDDYKNGFGDLSQNEYWIGNEAIHQLTSSFPSSTLVIEMASENWLGIWQQTYEGFRVGDEASEYLMTYTSTSPYPGN SGMGDSLIQVNNTMFCTADHNNNIDPNVNCGTVRQSGFWLCDPGNKCGHGNPNGQLMKTGNGEILYVYHEVFWNTLNVGT TSPWDMVIIHICQYQAKCPSVQTFTSWQKWFISSLQFCEISRQNKE |