Gene
| Gene Model ID | pfu_aug1.0_20698.1_33128 |
|---|---|
| Locus | scaffold20698.1 : 6796 ... 20424 : + |
| To GenomeBrowser | scaffold20698.1:6796..20424 |
| Genes list of scaffold | scaffold20698.1 |
| Synonym | pfu_aug2.0_355.1_17326 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_20698.1_33128.t1 | 1 | 1 | NUDIX_4 | 4 | 107 | 7.4e-13 | 47.9 | 1.6e-16 | 1.1e-12 | 47.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_20698.1_33128.t1 | gi|118403607|ref|NP_001072831.1| | A/G-specific adenine DNA glycosylase [Xenopus (Silurana) tropicalis] | 3.0e-15 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_20698.1_33128.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20698.1_33128.t1 atgacaggaagtttgctggcaggcctgtgggaatttccatccttagttcgtgaccctaacttcggggatatcaaaacacc tatttttttgttaagagatgcttgtggtgctacatgtaatcttttgagtacagtttgggaaggaacagttggagaggtga cgcacatattttcacatattcatcagacatactttgtacaaaaaatgaccattgatgaaggagtggtggaattaccatcc aatcccaaaactgctttaaagtgggtgacaaaagaggagttcttggatgcaggcacctcgactgccatgaaaaaggtctt caaggcttatgaaaacagttgtagtccaaaacaggacaagaaaaagaaagaagatccaaagcaaccatccataagttctt tcttcaaaaagaaatcataa |
|
Protein
| Protein ID | pfu_aug1.0_20698.1_33128.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20698.1_33128.t1 MTGSLLAGLWEFPSLVRDPNFGDIKTPIFLLRDACGATCNLLSTVWEGTVGEVTHIFSHIHQTYFVQKMTIDEGVVELPS NPKTALKWVTKEEFLDAGTSTAMKKVFKAYENSCSPKQDKKKKEDPKQPSISSFFKKKS |
|